Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC000068.2-201ENST00000608816 460 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 AC244107.2-201ENST00000611773 76 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNF6Q9Y252 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNF6Q9Y252 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF6Q9Y252 AC104260.2-201ENST00000623551 3497 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNF6Q9Y252 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF6Q9Y252 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF6Q9Y252 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF6Q9Y252 AC093849.1-201ENST00000563631 2209 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 SMG1P7-201ENST00000565246 2704 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF6Q9Y252 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF6Q9Y252 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF6Q9Y252 OR13C3-201ENST00000374781 1108 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 HMGB1P32-201ENST00000425971 565 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 TPTE2P1-204ENST00000435256 593 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 OR52B5P-201ENST00000435337 951 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 OR6D1P-201ENST00000436165 939 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 AC245047.2-201ENST00000441060 530 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 AL645937.3-201ENST00000453647 936 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 HMGN1P8-201ENST00000463578 288 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 RN7SL222P-201ENST00000476452 299 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 RPSAP50-201ENST00000481955 852 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 RN7SL808P-201ENST00000496066 299 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 OR4A46P-201ENST00000527255 933 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 AC126177.5-201ENST00000549599 178 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 AL139407.1-201ENST00000613826 1175 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 AC025574.2-201ENST00000615621 514 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 AC099654.6-201ENST00000636487 512 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 AC073869.7-201ENST00000640874 297 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 OR52B5P-202ENST00000641118 1110 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF6Q9Y252 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF6Q9Y252 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF6Q9Y252 AL731566.1-201ENST00000620490 1937 ntBASIC4.95□□□□□ -1.62
RNF6Q9Y252 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF6Q9Y252 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF6Q9Y252 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF6Q9Y252 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
RNF6Q9Y252 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF6Q9Y252 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.94□□□□□ -1.62
RNF6Q9Y252 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF6Q9Y252 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF6Q9Y252 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF6Q9Y252 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RNF6Q9Y252 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF6Q9Y252 AL450345.1-202ENST00000605741 3881 ntBASIC4.94□□□□□ -1.62
RNF6Q9Y252 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF6Q9Y252 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RNF6Q9Y252 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF6Q9Y252 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF6Q9Y252 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF6Q9Y252 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF6Q9Y252 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF6Q9Y252 RNA5SP335-201ENST00000363817 110 ntBASIC4.94□□□□□ -1.62
RNF6Q9Y252 RN7SKP6-201ENST00000364795 319 ntBASIC4.94□□□□□ -1.62
RNF6Q9Y252 RN7SKP213-201ENST00000410746 298 ntBASIC4.94□□□□□ -1.62
RNF6Q9Y252 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF6Q9Y252 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF6Q9Y252 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF6Q9Y252 AC090018.1-201ENST00000434369 367 ntBASIC4.94□□□□□ -1.62
RNF6Q9Y252 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF6Q9Y252 RPL12P3-201ENST00000440080 396 ntBASIC4.94□□□□□ -1.62
RNF6Q9Y252 GTF3AP5-201ENST00000442645 697 ntBASIC4.94□□□□□ -1.62
RNF6Q9Y252 RBMY2TP-201ENST00000451162 947 ntBASIC4.94□□□□□ -1.62
RNF6Q9Y252 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF6Q9Y252 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.94□□□□□ -1.62
RNF6Q9Y252 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF6Q9Y252 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF6Q9Y252 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms