Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 MRPS33P2-201ENST00000507850 322 ntBASIC9.71□□□□□ -0.86
SHROOM4Q9ULL8 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC9.71□□□□□ -0.86
SHROOM4Q9ULL8 AC125494.2-201ENST00000602431 657 ntBASIC9.71□□□□□ -0.86
SHROOM4Q9ULL8 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SHROOM4Q9ULL8 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 MIR129-1-201ENST00000384972 72 ntBASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 AC004074.1-201ENST00000421810 1063 ntBASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 AC124944.2-201ENST00000429866 1242 ntBASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 MTCYBP14-201ENST00000457471 715 ntBASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 AC006427.1-201ENST00000514359 712 ntBASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 AC100784.1-201ENST00000522790 310 ntBASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 KARSP3-201ENST00000571212 1504 ntBASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 AL020997.2-201ENST00000602607 184 ntBASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 AC105254.2-201ENST00000603636 436 ntBASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 AC079791.1-201ENST00000605356 973 ntBASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 AC007342.9-201ENST00000623877 1385 ntBASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 ZNRD1ASP-221ENST00000637794 1074 ntBASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC9.7□□□□□ -0.86
SHROOM4Q9ULL8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 RNU4-25P-201ENST00000410569 230 ntBASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 AC104849.1-201ENST00000462623 405 ntBASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 RN7SL814P-201ENST00000487715 300 ntBASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 AC138409.2-202ENST00000507274 458 ntBASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 GLUD1P3-202ENST00000508551 200 ntBASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 MTND2P17-201ENST00000550281 688 ntBASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 BNIP3P33-201ENST00000598912 569 ntBASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 VN1R81P-201ENST00000602085 372 ntBASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 AC010632.3-201ENST00000611377 369 ntBASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 MAPK10-349ENST00000641767 3661 ntBASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 CASC19-260ENST00000641828 2001 ntBASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 ZNF812P-201ENST00000457674 1694 ntBASIC9.69□□□□□ -0.86
SHROOM4Q9ULL8 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 OR9G4-201ENST00000302957 984 ntBASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 RNA5SP388-201ENST00000362584 119 ntBASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 AC021483.2-201ENST00000567415 758 ntBASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 MIR6133-201ENST00000617057 108 ntBASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
SHROOM4Q9ULL8 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 RNA5SP515-201ENST00000364570 118 ntBASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 SNORA70.6-201ENST00000383934 134 ntBASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 snoU13.1-201ENST00000459157 104 ntBASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 SEPT10P1-201ENST00000517342 1162 ntBASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 CR381572.2-201ENST00000624852 397 ntBASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC9.67□□□□□ -0.86
SHROOM4Q9ULL8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms