Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 MIR365B-201ENST00000362317 111 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 SNORA27.3-201ENST00000364937 134 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 RNU6-152P-201ENST00000384037 107 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 EI24P3-201ENST00000399046 1062 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 U3.36-201ENST00000408418 213 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 TRIM60P17-201ENST00000415181 719 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 RBMY2KP-201ENST00000418221 992 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 AL672138.1-201ENST00000450604 1015 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 SNORD125-201ENST00000459538 96 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 AC110775.1-201ENST00000513721 462 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 OR4H6P-202ENST00000603819 340 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 AC144521.1-201ENST00000607148 956 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 MIR6748-201ENST00000610433 71 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 AP002799.1-201ENST00000623552 423 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 AC002525.1-201ENST00000624392 1622 ntBASIC6.03□□□□□ -1.44
HDAC6Q9UBN7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 HSPA8P18-201ENST00000439846 1928 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 RNA5SP443-201ENST00000363083 132 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 RNA5SP187-201ENST00000384400 119 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 RN7SKP216-201ENST00000411050 312 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 VN1R31P-201ENST00000417498 730 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 RAB9AP5-201ENST00000437794 597 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 RAB9AP2-201ENST00000443911 597 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 TXNP2-201ENST00000443918 295 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 CYCSP53-201ENST00000455540 265 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 ATP5LP5-201ENST00000483050 299 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 AC138409.2-202ENST00000507274 458 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 RNU6-319P-201ENST00000516025 108 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 OR4A17P-201ENST00000526032 904 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 OR8G3P-201ENST00000533406 921 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 AP004607.2-201ENST00000533949 322 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 NMNAT1P5-201ENST00000559657 841 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 AC090527.3-201ENST00000619041 548 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 AC093909.5-201ENST00000621839 1799 ntBASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.02□□□□□ -1.45
HDAC6Q9UBN7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 AC083899.1-201ENST00000454465 3819 ntBASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 AL109941.1-201ENST00000401925 229 ntBASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 Y_RNA.625-201ENST00000411256 107 ntBASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 RPS26P13-201ENST00000419030 330 ntBASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 AC093162.1-201ENST00000419682 124 ntBASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 NPM1P26-201ENST00000426339 738 ntBASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.01□□□□□ -1.45
HDAC6Q9UBN7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms