Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AC009643.2-201ENST00000603543 1448 ntBASIC4.98□□□□□ -1.61
CHD7Q9P2D1 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 OR14L1P-202ENST00000641545 3009 ntBASIC4.98□□□□□ -1.61
CHD7Q9P2D1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 RPL23AP26-201ENST00000412728 464 ntBASIC4.98□□□□□ -1.61
CHD7Q9P2D1 FTH1P16-201ENST00000435241 552 ntBASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AC073052.1-201ENST00000440417 714 ntBASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 HNRNPRP2-201ENST00000528421 743 ntBASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AC243960.7-201ENST00000623532 707 ntBASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AP003400.2-201ENST00000624036 666 ntBASIC4.98□□□□□ -1.61
CHD7Q9P2D1 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 AC025574.1-201ENST00000554784 1653 ntBASIC4.97□□□□□ -1.61
CHD7Q9P2D1 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 AL117339.2-201ENST00000430475 180 ntBASIC4.97□□□□□ -1.61
CHD7Q9P2D1 BX842559.2-201ENST00000451418 605 ntBASIC4.97□□□□□ -1.61
CHD7Q9P2D1 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 AC017100.2-201ENST00000584628 355 ntBASIC4.97□□□□□ -1.61
CHD7Q9P2D1 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 AC046176.1-201ENST00000435260 1170 ntBASIC4.97□□□□□ -1.61
CHD7Q9P2D1 AC016772.1-201ENST00000444170 1261 ntBASIC4.97□□□□□ -1.61
CHD7Q9P2D1 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 PRPF38AP1-201ENST00000451976 933 ntBASIC4.97□□□□□ -1.61
CHD7Q9P2D1 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 FTH1P21-201ENST00000512179 511 ntBASIC4.97□□□□□ -1.61
CHD7Q9P2D1 RNU1-6P-201ENST00000516290 144 ntBASIC4.97□□□□□ -1.61
CHD7Q9P2D1 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CHD7Q9P2D1 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
CHD7Q9P2D1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
CHD7Q9P2D1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.96□□□□□ -1.61
CHD7Q9P2D1 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CHD7Q9P2D1 AC073137.1-201ENST00000605636 634 ntBASIC4.96□□□□□ -1.61
CHD7Q9P2D1 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 ZNF137P-201ENST00000456718 1920 ntBASIC4.96□□□□□ -1.62
CHD7Q9P2D1 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 AC133552.1-201ENST00000569988 4007 ntBASIC4.96□□□□□ -1.62
CHD7Q9P2D1 AC053481.1-201ENST00000467217 306 ntBASIC4.96□□□□□ -1.62
CHD7Q9P2D1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 MTCYBP13-201ENST00000578634 1093 ntBASIC4.96□□□□□ -1.62
CHD7Q9P2D1 BNIP3P11-201ENST00000603878 563 ntBASIC4.96□□□□□ -1.62
CHD7Q9P2D1 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.96□□□□□ -1.62
CHD7Q9P2D1 AC004777.1-201ENST00000624317 287 ntBASIC4.96□□□□□ -1.62
CHD7Q9P2D1 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 AC073365.1-203ENST00000641055 1992 ntBASIC4.96□□□□□ -1.62
CHD7Q9P2D1 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.96□□□□□ -1.62
CHD7Q9P2D1 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC4.96□□□□□ -1.62
CHD7Q9P2D1 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 MIR372-201ENST00000362225 67 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 RPS27AP11-201ENST00000402798 447 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AC105137.1-201ENST00000484355 562 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms