Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 LINC00557-201ENST00000563184 1279 ntBASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 AC021483.2-201ENST00000567415 758 ntBASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 IMMP1LP3-201ENST00000604197 224 ntBASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 AC109309.2-201ENST00000612597 332 ntBASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 MTND4P21-201ENST00000453886 1357 ntBASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BLOC1S4Q9NUP1 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 U3.3-201ENST00000362986 216 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 RNU6-40P-201ENST00000384254 107 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 CHMP1B2P-201ENST00000399581 597 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 HSPA8P15-201ENST00000401676 786 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 NPM1P37-201ENST00000403105 874 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 Z86062.1-201ENST00000406773 777 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 EI24P4-201ENST00000423683 1078 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 MTND4LP7-201ENST00000431728 294 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 MTND2P2-201ENST00000434633 945 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 CLUHP1-201ENST00000435012 1190 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AC092691.2-201ENST00000461787 803 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 RPS4XP1-201ENST00000482189 787 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AC093663.2-201ENST00000484625 313 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 EIF3LP3-201ENST00000495197 822 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 EIF3KP3-201ENST00000514461 639 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AP003168.1-201ENST00000530091 307 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AC040174.2-201ENST00000602701 465 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AC069307.1-201ENST00000602820 447 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AL356490.1-201ENST00000623079 479 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 CASC19-264ENST00000641912 1184 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AC006210.2-201ENST00000367074 1545 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 AC023421.1-201ENST00000590535 1785 ntBASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BLOC1S4Q9NUP1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 AL360270.2-201ENST00000562952 5985 ntBASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 RAD1P1-201ENST00000231383 813 ntBASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 SNORA5.1-201ENST00000384275 131 ntBASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 RNU6-225P-201ENST00000384613 103 ntBASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 MIR105-1-201ENST00000385222 81 ntBASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 AL391361.1-201ENST00000405580 489 ntBASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 RNA5SP498-201ENST00000411342 120 ntBASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 RPL12P9-201ENST00000412942 488 ntBASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 NPM1P4-201ENST00000414095 812 ntBASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 FAM96AP1-201ENST00000430879 482 ntBASIC5.87□□□□□ -1.47
BLOC1S4Q9NUP1 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms