Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MIR4691-201ENST00000583764 85 ntBASIC5.36□□□□□ -1.55
SIX2Q9NPC8 EIF1P5-201ENST00000585002 234 ntBASIC5.36□□□□□ -1.55
SIX2Q9NPC8 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.36□□□□□ -1.55
SIX2Q9NPC8 TAS2R6P-201ENST00000605022 826 ntBASIC5.36□□□□□ -1.55
SIX2Q9NPC8 AC005377.1-201ENST00000605126 456 ntBASIC5.36□□□□□ -1.55
SIX2Q9NPC8 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIX2Q9NPC8 AC004808.2-201ENST00000627965 773 ntBASIC5.36□□□□□ -1.55
SIX2Q9NPC8 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.36□□□□□ -1.55
SIX2Q9NPC8 AL139254.3-201ENST00000641097 674 ntBASIC5.36□□□□□ -1.55
SIX2Q9NPC8 LINC01739-205ENST00000641890 573 ntBASIC5.36□□□□□ -1.55
SIX2Q9NPC8 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SIX2Q9NPC8 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.36□□□□□ -1.55
SIX2Q9NPC8 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIX2Q9NPC8 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.36□□□□□ -1.55
SIX2Q9NPC8 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIX2Q9NPC8 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIX2Q9NPC8 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SIX2Q9NPC8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.36□□□□□ -1.55
SIX2Q9NPC8 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 NCOA4P2-201ENST00000340589 1813 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 RPL23P2-201ENST00000320371 421 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 RNA5SP435-201ENST00000364044 108 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 RNU6-891P-201ENST00000384280 111 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 RNU1-106P-201ENST00000384382 164 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 TMBIM7P-201ENST00000418074 855 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 OR2AH1P-201ENST00000425717 928 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 OR7E125P-201ENST00000443450 846 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 AC000111.2-201ENST00000448200 210 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 AURKAPS1-201ENST00000451805 1212 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 HMGN1P8-201ENST00000463578 288 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 RN7SL727P-201ENST00000482164 296 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 COX6B1P5-201ENST00000509843 249 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 OR7E128P-201ENST00000532736 1024 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 AC005014.3-201ENST00000605985 190 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 AC106730.3-201ENST00000624568 641 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 HPVC1-201ENST00000629899 1198 ntBASIC5.35□□□□□ -1.55
SIX2Q9NPC8 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SIX2Q9NPC8 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 ECM1P2-201ENST00000503354 1577 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 RN7SKP186-201ENST00000365371 303 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 SNORA66-201ENST00000384792 133 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 AC005522.1-201ENST00000395416 346 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 BMS1P13-201ENST00000417301 885 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 PPIAP20-201ENST00000449839 135 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 MRPS33P2-201ENST00000507850 322 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 AL049874.4-201ENST00000557593 255 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 AC007225.2-201ENST00000562529 256 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 RPL21P136-201ENST00000605378 396 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 MIR6862-1-201ENST00000613016 70 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 MIR6862-2-201ENST00000614755 70 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.34□□□□□ -1.55
SIX2Q9NPC8 MIR6886-201ENST00000619864 61 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 AL356094.1-201ENST00000624663 1212 ntBASIC5.34□□□□□ -1.55
SIX2Q9NPC8 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms