Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 ATP5HP3-201ENST00000396994 486 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 SPTLC1P2-201ENST00000407089 121 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 SNORA77-201ENST00000408716 125 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 DDX39BP1-205ENST00000422507 192 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 RPL35AP21-201ENST00000437667 333 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 RPS29P9-201ENST00000440360 171 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 TXNP5-201ENST00000441043 315 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 MRPL35P2-201ENST00000448009 511 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 FTH1P11-201ENST00000517577 551 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 RPL23AP53-201ENST00000521854 457 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 OR11J2P-201ENST00000555298 907 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 AC016180.1-201ENST00000567945 403 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 AC015660.5-201ENST00000623238 564 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 THAP12P8-201ENST00000447914 2115 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 AC245100.2-201ENST00000454544 1679 ntBASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 AL603750.1-201ENST00000624216 1717 ntBASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 U8.4-201ENST00000363626 134 ntBASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 U3.36-201ENST00000408418 213 ntBASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 RNU2-22P-201ENST00000411266 212 ntBASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 AC211486.3-201ENST00000412694 621 ntBASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 BRWD1P3-201ENST00000428816 390 ntBASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 MTCO3P17-201ENST00000443775 513 ntBASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 AL157385.1-201ENST00000446973 268 ntBASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 AL354714.3-201ENST00000447284 493 ntBASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 RPS17P2-201ENST00000461663 408 ntBASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 AC008953.1-201ENST00000497334 318 ntBASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 AC011840.5-201ENST00000582125 771 ntBASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCSER1Q9C0I3 AC011447.7-201ENST00000624228 1590 ntBASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 AC100778.3-201ENST00000580060 1750 ntBASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 AC017079.1-201ENST00000333650 415 ntBASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 BTG3P1-201ENST00000435859 716 ntBASIC5.67□□□□□ -1.5
CCSER1Q9C0I3 BTF3P6-201ENST00000448054 499 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms