Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 RNU6-298P-201ENST00000390888 96 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 HMGB3P19-201ENST00000403971 560 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AL009179.1-201ENST00000406085 265 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AL592310.1-201ENST00000414330 671 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 XKRYP1-201ENST00000423438 492 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 VN1R42P-201ENST00000424651 344 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 MTCO1P51-201ENST00000427672 1060 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 MTND2P5-201ENST00000432656 1006 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 XKRYP2-201ENST00000432915 492 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC092447.2-201ENST00000435487 669 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC044797.1-201ENST00000445744 679 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 EIF2S2P2-201ENST00000447161 982 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 RPL7P61-201ENST00000451721 751 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 HMGB1P26-201ENST00000452520 628 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC093166.2-201ENST00000455969 1017 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 RPL21P18-201ENST00000469899 480 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 CYCSP20-201ENST00000473154 315 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 RN7SL799P-201ENST00000475891 298 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 OR5H3P-201ENST00000502817 919 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC008427.1-201ENST00000503102 655 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 MTCYBP35-201ENST00000503630 1137 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC005351.1-201ENST00000511152 786 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 PMS2P3-207ENST00000529061 717 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AL132857.1-201ENST00000555180 708 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 DHFRP1-201ENST00000579682 559 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC114878.2-201ENST00000604863 1251 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AL450336.1-201ENST00000605180 586 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC211433.2-201ENST00000608433 387 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 MIR6719-201ENST00000622428 87 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 AC063952.1-203ENST00000634410 658 ntBASIC5.67□□□□□ -1.5
CIPCQ9C0C6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CIPCQ9C0C6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 AL592429.1-201ENST00000403909 1473 ntBASIC5.66□□□□□ -1.5
CIPCQ9C0C6 AP002512.4-202ENST00000641599 4530 ntBASIC5.66□□□□□ -1.5
CIPCQ9C0C6 AP000547.3-204ENST00000588548 2523 ntBASIC5.66□□□□□ -1.5
CIPCQ9C0C6 AL590763.1-201ENST00000398297 1545 ntBASIC5.66□□□□□ -1.5
CIPCQ9C0C6 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.66□□□□□ -1.5
CIPCQ9C0C6 U3.10-201ENST00000364459 214 ntBASIC5.66□□□□□ -1.5
CIPCQ9C0C6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 RNU6-468P-201ENST00000384003 109 ntBASIC5.66□□□□□ -1.5
CIPCQ9C0C6 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 RPL7P58-201ENST00000402913 758 ntBASIC5.66□□□□□ -1.5
CIPCQ9C0C6 AC096921.1-201ENST00000411661 375 ntBASIC5.66□□□□□ -1.5
CIPCQ9C0C6 AL158827.1-201ENST00000416300 391 ntBASIC5.66□□□□□ -1.5
CIPCQ9C0C6 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 RNGTTP1-201ENST00000420965 728 ntBASIC5.66□□□□□ -1.5
CIPCQ9C0C6 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 SNORD11.1-201ENST00000459482 85 ntBASIC5.66□□□□□ -1.5
CIPCQ9C0C6 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.66□□□□□ -1.5
CIPCQ9C0C6 ASNSP4-201ENST00000511103 447 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms