Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 MIR4737-201ENST00000583979 81 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC011487.3-201ENST00000593607 453 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC234771.5-201ENST00000600161 514 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC108359.1-201ENST00000616451 1211 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC010435.1-201ENST00000623353 1177 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC022417.1-201ENST00000624768 1303 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC012618.3-205ENST00000637896 1496 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 GJA6P-201ENST00000415117 1042 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 OR2AM1P-201ENST00000422137 422 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC245028.1-201ENST00000423259 256 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 MGAT2P2-201ENST00000427194 797 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 RPL34P20-201ENST00000442771 351 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC009220.1-201ENST00000451614 275 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC006463.2-201ENST00000473326 348 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 LDHBP3-201ENST00000514909 822 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AL671862.1-201ENST00000515851 349 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC008033.2-201ENST00000542626 177 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 OR7A8P-201ENST00000595427 913 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 MEMO1P5-201ENST00000604810 406 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AL356752.1-201ENST00000615844 593 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 AC100778.3-201ENST00000580060 1750 ntBASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 RNA5SP223-201ENST00000365174 120 ntBASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 MIR192-201ENST00000384915 110 ntBASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 AC013442.1-201ENST00000397347 228 ntBASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 AL121878.1-201ENST00000418638 859 ntBASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 UBE2V2P4-201ENST00000447495 259 ntBASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 AC009852.2-201ENST00000567898 485 ntBASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 AF230666.2-201ENST00000602328 725 ntBASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 AL731566.2-201ENST00000618971 317 ntBASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.17□□□□□ -1.42
RPAP1Q9BWH6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 RNA5SP455-201ENST00000365190 119 ntBASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 AL138878.2-201ENST00000440581 1241 ntBASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 HMGN2P25-201ENST00000486956 268 ntBASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 COX6B1P5-201ENST00000509843 249 ntBASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 ASNSP4-201ENST00000511103 447 ntBASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 OR7E128P-201ENST00000532736 1024 ntBASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 CASC19-221ENST00000641309 1382 ntBASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RPAP1Q9BWH6 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms