Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC3.91□□□□□ -1.78
LITAFQ99732 AP000550.3-201ENST00000637734 379 ntBASIC3.91□□□□□ -1.78
LITAFQ99732 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LITAFQ99732 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LITAFQ99732 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.91□□□□□ -1.78
LITAFQ99732 AC000367.1-201ENST00000452711 1766 ntBASIC3.91□□□□□ -1.78
LITAFQ99732 AC012078.1-201ENST00000405035 1646 ntBASIC3.91□□□□□ -1.78
LITAFQ99732 UGT2B26P-201ENST00000508672 1613 ntBASIC3.91□□□□□ -1.78
LITAFQ99732 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LITAFQ99732 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LITAFQ99732 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC3.91□□□□□ -1.78
LITAFQ99732 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC3.91□□□□□ -1.78
LITAFQ99732 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LITAFQ99732 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LITAFQ99732 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LITAFQ99732 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
LITAFQ99732 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LITAFQ99732 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC3.9□□□□□ -1.78
LITAFQ99732 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LITAFQ99732 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LITAFQ99732 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LITAFQ99732 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LITAFQ99732 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LITAFQ99732 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
LITAFQ99732 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LITAFQ99732 THAP12P5-201ENST00000405864 2275 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LITAFQ99732 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
LITAFQ99732 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LITAFQ99732 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LITAFQ99732 RNA5SP346-201ENST00000363541 121 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LITAFQ99732 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 RNU6-185P-201ENST00000384421 107 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AC105402.1-201ENST00000413336 545 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.9□□□□□ -1.79
LITAFQ99732 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 PTP4A1P1-201ENST00000420539 515 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 RPL7P53-201ENST00000421245 739 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 AL365203.2-201ENST00000423444 196 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 VN1R21P-201ENST00000426703 765 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC112492.2-201ENST00000432774 1030 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 MTND1P32-201ENST00000433043 938 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 NDUFB4P8-201ENST00000435351 367 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 RPL12P18-201ENST00000437175 325 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 RPS12P17-201ENST00000438591 377 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 MTND5P2-201ENST00000442927 1142 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 RPL6P24-201ENST00000445338 864 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 SEPHS1P4-201ENST00000446112 1176 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AC005002.1-201ENST00000447458 540 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC110749.1-201ENST00000462007 357 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 CBX5P1-201ENST00000468470 561 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 RPS3AP49-201ENST00000472161 790 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 RPL23AP37-201ENST00000479658 549 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 COX6B1P2-201ENST00000489624 230 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 OR2A20P-203ENST00000498397 1268 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC084024.2-201ENST00000503480 791 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 RNA5SP418-201ENST00000515951 117 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC083923.1-201ENST00000523708 376 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 NBEAP1-201ENST00000554452 979 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC116158.1-201ENST00000560231 2129 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AC087465.1-201ENST00000560574 245 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AADACP1-206ENST00000561502 1193 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 BMS1P8-201ENST00000565049 1178 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 MIR5708-201ENST00000579723 85 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.9□□□□□ -1.79
LITAFQ99732 SYPL1P2-201ENST00000582878 727 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 COX6CP7-201ENST00000597056 208 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC125494.3-201ENST00000602759 455 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms