Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 SNORA31.13-201ENST00000516624 135 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 TMEM97P2-201ENST00000517841 403 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 ZNF322P1-201ENST00000568013 1209 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 AC019131.2-201ENST00000609071 870 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 AC022106.1-201ENST00000612834 766 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 AC139792.2-201ENST00000624218 587 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 AC130304.1-201ENST00000622942 2385 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNX18Q96RF0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC020656.2-201ENST00000613291 5309 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNX18Q96RF0 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX18Q96RF0 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 RNA5SP375-201ENST00000362975 119 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 RNA5SP122-201ENST00000384457 108 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 ATP5HP3-201ENST00000396994 486 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 METTL15P3-201ENST00000415522 1221 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC093084.1-201ENST00000424233 687 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 GTF2IP3-201ENST00000433887 494 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 EIF5AP4-201ENST00000441206 465 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 RPL5P7-201ENST00000444235 813 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC112492.1-201ENST00000449607 712 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC016027.4-201ENST00000450866 277 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC144530.1-201ENST00000452862 555 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 RPL6P9-201ENST00000466502 859 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 NDUFA5P5-201ENST00000468361 342 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC069304.1-201ENST00000491593 704 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC025459.1-201ENST00000504072 156 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 BTG4P1-201ENST00000510421 183 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 RNU6-1028P-201ENST00000517164 93 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC013701.1-201ENST00000522657 465 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC079064.1-201ENST00000528365 362 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 LRRC6P1-201ENST00000532188 885 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 ZNF321P-202ENST00000550843 495 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC002519.2-203ENST00000567043 837 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC008507.3-201ENST00000585753 472 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AL049844.2-201ENST00000604280 628 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC124916.2-201ENST00000604416 224 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC079610.2-201ENST00000604818 690 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC013470.4-201ENST00000619978 986 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC022400.9-201ENST00000623633 273 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC073488.6-201ENST00000632293 754 ntBASIC5.38□□□□□ -1.55
SNX18Q96RF0 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SNX18Q96RF0 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms