Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RPS29P10-201ENST00000439197 166 ntBASIC4.83□□□□□ -1.64
COL21A1Q96P44 RPL5P22-201ENST00000480199 884 ntBASIC4.83□□□□□ -1.64
COL21A1Q96P44 HMGB3P16-201ENST00000508037 287 ntBASIC4.83□□□□□ -1.64
COL21A1Q96P44 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.83□□□□□ -1.64
COL21A1Q96P44 AC090022.1-201ENST00000546569 311 ntBASIC4.83□□□□□ -1.64
COL21A1Q96P44 SETP1-201ENST00000556014 845 ntBASIC4.83□□□□□ -1.64
COL21A1Q96P44 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
COL21A1Q96P44 BNIP3P35-201ENST00000604530 490 ntBASIC4.83□□□□□ -1.64
COL21A1Q96P44 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.83□□□□□ -1.64
COL21A1Q96P44 AP002505.2-201ENST00000623585 696 ntBASIC4.83□□□□□ -1.64
COL21A1Q96P44 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.83□□□□□ -1.64
COL21A1Q96P44 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.83□□□□□ -1.64
COL21A1Q96P44 OR52B5P-202ENST00000641118 1110 ntBASIC4.83□□□□□ -1.64
COL21A1Q96P44 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL21A1Q96P44 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.83□□□□□ -1.64
COL21A1Q96P44 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COL21A1Q96P44 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL21A1Q96P44 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.83□□□□□ -1.64
COL21A1Q96P44 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL21A1Q96P44 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.83□□□□□ -1.64
COL21A1Q96P44 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL21A1Q96P44 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL21A1Q96P44 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL21A1Q96P44 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL21A1Q96P44 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL21A1Q96P44 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL21A1Q96P44 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL21A1Q96P44 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 PROS2P-201ENST00000474651 1951 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL21A1Q96P44 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 MTHFD2P5-201ENST00000320415 844 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 U3.2-201ENST00000362981 210 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 U3.3-201ENST00000362986 216 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 RNU1-43P-201ENST00000365052 165 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL21A1Q96P44 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL21A1Q96P44 MIR600-201ENST00000385007 98 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 AL035079.1-201ENST00000405210 287 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL21A1Q96P44 RN7SKP97-201ENST00000410966 333 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 FTLP19-201ENST00000433300 394 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 NPM1P48-201ENST00000436002 853 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 RPL35AP21-201ENST00000437667 333 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 BTF3P6-201ENST00000448054 499 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 FAR2P1-206ENST00000449736 709 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 AL591473.1-201ENST00000464297 313 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 RN7SL629P-201ENST00000489622 285 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 AC072052.1-201ENST00000496556 306 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 HIGD1AP14-201ENST00000507617 282 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 AC138938.1-201ENST00000515431 782 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 RN7SKP5-201ENST00000517045 272 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 IGLV2-28-201ENST00000520681 304 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 AC024940.3-201ENST00000538551 316 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 AC095055.1-201ENST00000603472 1113 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 RNU6-84P-201ENST00000607737 102 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 AL512624.1-201ENST00000613638 469 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 AC022106.2-201ENST00000620114 757 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 AC015871.5-202ENST00000623252 701 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL21A1Q96P44 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL21A1Q96P44 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 ZNF733P-202ENST00000444809 1573 ntBASIC4.82□□□□□ -1.64
COL21A1Q96P44 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
COL21A1Q96P44 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 AC235565.1-201ENST00000456962 1325 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 AC021242.1-201ENST00000507315 2035 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 SNORA17.1-201ENST00000362945 126 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 RNA5SP90-201ENST00000364801 99 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL21A1Q96P44 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL21A1Q96P44 RNU6-171P-201ENST00000384354 107 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 DUTP5-201ENST00000406790 469 ntBASIC4.81□□□□□ -1.64
COL21A1Q96P44 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms