Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC007114.2-201ENST00000576014 4281 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 TMSB4XP2-201ENST00000335179 210 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 RNY3P14-201ENST00000384309 102 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 RNU1-46P-201ENST00000384425 164 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AL512430.2-201ENST00000406786 339 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 RPL7P44-201ENST00000424827 742 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 MTCO1P54-201ENST00000430139 712 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 OR13K1P-201ENST00000444577 975 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 ARL5AP2-201ENST00000444698 533 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC027673.1-201ENST00000456245 405 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 MTND1P16-201ENST00000465177 898 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC126182.1-201ENST00000478134 357 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 GAPDHP39-201ENST00000481866 979 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC063943.2-201ENST00000495697 534 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC096751.1-202ENST00000502691 1067 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC090071.1-201ENST00000507713 644 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC083906.1-201ENST00000509298 406 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 IGHV3-57-201ENST00000520143 280 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AL589743.6-201ENST00000611025 117 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC015819.1-201ENST00000613588 663 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC013476.2-201ENST00000614456 459 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AP001264.1-201ENST00000620602 703 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC073862.4-201ENST00000622982 854 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC004836.1-201ENST00000623032 634 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 TNPO1P2-201ENST00000426249 2665 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 MTCO1P6-201ENST00000481192 1384 ntBASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTCHD1Q96NR3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms