Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RTP4Q96DX8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RTP4Q96DX8 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RTP4Q96DX8 AC073136.1-201ENST00000449426 2884 ntBASIC5.39□□□□□ -1.55
RTP4Q96DX8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RTP4Q96DX8 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RTP4Q96DX8 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RTP4Q96DX8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RTP4Q96DX8 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.39□□□□□ -1.55
RTP4Q96DX8 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RTP4Q96DX8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 SNORA70-201ENST00000384436 135 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 RPL35AP24-201ENST00000413846 330 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 PCNPP4-201ENST00000414817 517 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 TCEA1P3-201ENST00000443005 880 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 MTND2P25-201ENST00000449028 610 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 SBDSP1-204ENST00000453858 737 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 RN7SL610P-201ENST00000463845 291 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 RPL7P39-201ENST00000481157 744 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 OR2A3P-201ENST00000493774 953 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 AC024558.1-201ENST00000505008 528 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 AC093763.2-201ENST00000505334 1223 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 HMGB1P40-201ENST00000525121 540 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 AC004825.1-201ENST00000555068 586 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 AC096947.1-201ENST00000603233 470 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 AC027449.1-201ENST00000608890 407 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 MIR6730-201ENST00000622213 67 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 AC010872.1-201ENST00000624225 675 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 AL360270.2-201ENST00000562952 5985 ntBASIC5.38□□□□□ -1.55
RTP4Q96DX8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.38□□□□□ -1.55
RTP4Q96DX8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTP4Q96DX8 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTP4Q96DX8 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTP4Q96DX8 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RTP4Q96DX8 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 NCOA4P2-201ENST00000340589 1813 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 MAPK10-338ENST00000641647 3362 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTP4Q96DX8 MIR7-1-201ENST00000384871 110 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 HSPA8P15-201ENST00000401676 786 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 PTGES3P2-201ENST00000407942 482 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 AC009238.2-201ENST00000431026 355 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 AL161722.2-201ENST00000434731 981 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 CYCSP12-201ENST00000437729 300 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 PTMAP6-201ENST00000439110 327 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 MTND5P8-201ENST00000449817 1083 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 MTND2P30-201ENST00000456663 382 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 AC108161.1-201ENST00000461060 402 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 RN7SL189P-201ENST00000468631 289 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 RN7SL447P-201ENST00000494711 245 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 AC093801.2-201ENST00000503966 1050 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 OR10G5P-201ENST00000532733 358 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 AC006349.1-201ENST00000555526 235 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.37□□□□□ -1.55
RTP4Q96DX8 ABI1P1-201ENST00000603375 1120 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 AL671309.1-201ENST00000603750 544 ntBASIC5.37□□□□□ -1.55
RTP4Q96DX8 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms