Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 ZNF322P1-201ENST00000568013 1209 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC100767.2-201ENST00000604840 693 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC084782.3-201ENST00000612282 578 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC024023.1-201ENST00000624530 922 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 RNU6-224P-201ENST00000384055 107 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 SNORD116-2-201ENST00000384274 95 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 SNORD116-6-201ENST00000384711 96 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 ATP5F1P2-201ENST00000398143 760 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 RNU4-22P-201ENST00000411058 166 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC092638.1-201ENST00000411966 1275 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 METTL15P3-201ENST00000415522 1221 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 RPS3AP37-201ENST00000419176 745 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 RNGTTP1-201ENST00000420965 728 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 RPS3P2-201ENST00000421346 701 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AL513175.2-201ENST00000422071 443 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AL592437.1-201ENST00000443781 492 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 HMGB3P6-201ENST00000444896 598 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC004022.1-201ENST00000447766 1066 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 OR51B8P-201ENST00000449892 769 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AP006222.1-205ENST00000450734 457 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 VN1R40P-201ENST00000455196 941 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AL122001.1-201ENST00000457027 370 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 snoU13.29-201ENST00000459370 104 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 RN7SL570P-201ENST00000484405 292 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC073610.1-201ENST00000489971 396 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AP000563.1-201ENST00000490865 758 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC009120.1-201ENST00000493458 473 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 NENFP3-201ENST00000503735 313 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC021678.3-201ENST00000517893 476 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 MTCYBP27-201ENST00000555160 670 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC092121.1-201ENST00000569452 202 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 RBM22P1-201ENST00000578589 1214 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 FAM27E4-201ENST00000605259 342 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 HIRAP1-201ENST00000605318 787 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AP004607.9-201ENST00000618202 316 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC073569.3-201ENST00000619055 682 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 342.3 ms