Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 OR8K2P-201ENST00000524645 927 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AL512310.9-201ENST00000553311 948 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AC026826.3-201ENST00000561747 158 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 MIR744-201ENST00000578242 98 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AL359091.2-201ENST00000609303 556 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 RN7SL544P-201ENST00000617232 284 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 RN7SL763P-201ENST00000620922 284 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AC007342.8-201ENST00000623278 678 ntBASIC5.2□□□□□ -1.58
VPS33AQ96AX1 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS33AQ96AX1 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC021242.1-201ENST00000507315 2035 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC009313.2-201ENST00000417893 1941 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 ZNF90P1-201ENST00000480493 1951 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 RNU1-65P-201ENST00000363919 148 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 RNA5SP131-201ENST00000365452 119 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 SUGT1P2-201ENST00000379452 992 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 OR7E101P-201ENST00000400428 513 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AL356057.1-202ENST00000402263 756 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 RN7SKP97-201ENST00000410966 333 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 RPL12P9-201ENST00000412942 488 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 PCNPP4-201ENST00000414817 517 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC009302.1-201ENST00000417147 390 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AL035660.1-201ENST00000422041 222 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 HSPD1P12-201ENST00000429127 1069 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 MTND4P15-201ENST00000437913 1033 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AL513321.1-201ENST00000441175 761 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AL354710.1-201ENST00000453641 246 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 HMGB1P4-201ENST00000455362 567 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 RN7SL591P-201ENST00000496150 292 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC103833.1-201ENST00000517442 172 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC027369.5-201ENST00000533838 755 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC233266.2-201ENST00000567067 528 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 MTCYBP13-201ENST00000578634 1093 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 PRPF19P1-201ENST00000584766 898 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC244107.2-201ENST00000611773 76 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AP003497.2-201ENST00000624220 967 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 AC087565.3-203ENST00000641018 837 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 SAMMSON-227ENST00000642114 1199 ntBASIC5.19□□□□□ -1.58
VPS33AQ96AX1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms