Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 RNA5SP232-201ENST00000364144 119 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 OR8V1P-201ENST00000395193 873 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 MIR1271-201ENST00000408537 86 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 RN7SKP16-201ENST00000410180 299 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 RN7SKP125-201ENST00000410481 302 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC245060.4-201ENST00000413293 1121 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 Z93019.1-201ENST00000416450 973 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC092570.3-201ENST00000420113 693 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 GAPDHP34-201ENST00000432112 823 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 Z84478.1-201ENST00000438230 1219 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 XKRYP6-201ENST00000440468 1116 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 XKRYP3-201ENST00000442113 1116 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 RAD1P2-201ENST00000446414 663 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC098818.1-201ENST00000478593 252 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC073073.1-201ENST00000493920 463 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC113430.1-201ENST00000506872 718 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC114781.3-201ENST00000512083 142 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC138938.1-201ENST00000515431 782 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC022882.1-201ENST00000532142 501 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC024940.3-201ENST00000538551 316 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 MIR744-201ENST00000578242 98 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC090312.1-201ENST00000580637 348 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 BMS1P21-201ENST00000634565 365 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 OR55B1P-203ENST00000641518 2602 ntBASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 YES1P1-201ENST00000418510 1628 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AL034370.1-201ENST00000397254 1590 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 OR13C3-201ENST00000374781 1108 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC013442.1-201ENST00000397347 228 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AL359643.1-201ENST00000404109 423 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 DHFRP5-201ENST00000406944 564 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 OR2AT2P-201ENST00000413438 905 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 RPL36AP10-201ENST00000421785 322 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 SRSF1P1-201ENST00000424058 520 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AL389925.1-201ENST00000432257 728 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 Z85994.2-201ENST00000434327 452 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 RSL24D1P2-201ENST00000445584 366 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 TIMM8BP2-201ENST00000445940 251 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC105399.1-202ENST00000447303 205 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 RPL31P53-201ENST00000457065 348 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 APOOP2-201ENST00000461561 539 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC058823.1-201ENST00000485315 474 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC109481.1-201ENST00000509173 282 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 snoU109.6-201ENST00000516831 118 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 HMGB1P19-201ENST00000517578 577 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 NRBF2P4-201ENST00000520874 850 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC027369.2-201ENST00000528030 440 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AGGF1P9-201ENST00000561884 913 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 BNIP3P7-201ENST00000605641 516 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 LINC00901.1-201ENST00000617252 152 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC118658.2-201ENST00000618697 459 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms