Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AP002373.2-201ENST00000541631 1060 ntBASIC6.62□□□□□ -1.35
SYNE4Q8N205 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.62□□□□□ -1.35
SYNE4Q8N205 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.62□□□□□ -1.35
SYNE4Q8N205 DPPA3P2-201ENST00000553589 478 ntBASIC6.62□□□□□ -1.35
SYNE4Q8N205 AC012414.2-201ENST00000559474 187 ntBASIC6.62□□□□□ -1.35
SYNE4Q8N205 AC093510.2-201ENST00000562820 896 ntBASIC6.62□□□□□ -1.35
SYNE4Q8N205 RN7SL356P-201ENST00000582228 248 ntBASIC6.62□□□□□ -1.35
SYNE4Q8N205 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
SYNE4Q8N205 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.62□□□□□ -1.35
SYNE4Q8N205 EIF3FP1-201ENST00000613970 806 ntBASIC6.62□□□□□ -1.35
SYNE4Q8N205 AC091905.4-201ENST00000623432 202 ntBASIC6.62□□□□□ -1.35
SYNE4Q8N205 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SYNE4Q8N205 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.62□□□□□ -1.35
SYNE4Q8N205 AP004289.1-201ENST00000436307 2205 ntBASIC6.62□□□□□ -1.35
SYNE4Q8N205 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SYNE4Q8N205 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SYNE4Q8N205 AL513548.1-201ENST00000562904 1724 ntBASIC6.62□□□□□ -1.35
SYNE4Q8N205 AL034549.2-201ENST00000618285 3373 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC015799.1-201ENST00000622996 3122 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AL359715.3-201ENST00000569267 2123 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AL449283.1-201ENST00000602631 3403 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 KYNUP3-201ENST00000574386 1341 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC010132.2-201ENST00000295493 1043 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 MIR600-201ENST00000385007 98 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 TRAV35-201ENST00000390462 330 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AL050305.1-201ENST00000399993 1230 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 HSPA8P15-201ENST00000401676 786 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 GJA6P-201ENST00000415117 1042 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 MTND2P16-201ENST00000419987 799 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 ELOCP13-201ENST00000443934 329 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 TRY2P-201ENST00000448860 689 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 ATG10-AS1-201ENST00000504846 648 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC091912.1-201ENST00000511351 248 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC027338.1-201ENST00000514840 825 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC104997.1-201ENST00000519761 717 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 MTCYBP28-201ENST00000566728 1132 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC027216.1-201ENST00000577726 685 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 Z99289.3-201ENST00000605586 594 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AL356608.1-201ENST00000610034 820 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC093799.2-201ENST00000610062 578 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC009032.1-201ENST00000617574 431 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AP003789.1-201ENST00000617737 605 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 AC092747.4-201ENST00000620519 1861 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 CASC19-261ENST00000641853 1638 ntBASIC6.61□□□□□ -1.35
SYNE4Q8N205 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SYNE4Q8N205 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SYNE4Q8N205 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SYNE4Q8N205 MTND5P31-201ENST00000419366 1374 ntBASIC6.6□□□□□ -1.35
SYNE4Q8N205 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.6□□□□□ -1.35
SYNE4Q8N205 AL645568.2-201ENST00000432815 1337 ntBASIC6.6□□□□□ -1.35
SYNE4Q8N205 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.6□□□□□ -1.35
SYNE4Q8N205 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SYNE4Q8N205 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.6□□□□□ -1.35
SYNE4Q8N205 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SYNE4Q8N205 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SYNE4Q8N205 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SYNE4Q8N205 RNVU1-6-201ENST00000364688 164 ntBASIC6.6□□□□□ -1.35
SYNE4Q8N205 AC069282.1-201ENST00000411911 526 ntBASIC6.6□□□□□ -1.35
SYNE4Q8N205 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.6□□□□□ -1.35
SYNE4Q8N205 MTCO2P23-201ENST00000425216 680 ntBASIC6.6□□□□□ -1.35
SYNE4Q8N205 AL590399.2-201ENST00000427536 309 ntBASIC6.6□□□□□ -1.35
SYNE4Q8N205 C4BPAP2-201ENST00000428434 478 ntBASIC6.6□□□□□ -1.35
SYNE4Q8N205 MTCO1P57-201ENST00000432182 261 ntBASIC6.6□□□□□ -1.35
SYNE4Q8N205 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.6□□□□□ -1.35
SYNE4Q8N205 Z77249.1-201ENST00000444622 1175 ntBASIC6.6□□□□□ -1.35
SYNE4Q8N205 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms