Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LYSMD3Q7Z3D4 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.24□□□□□ -1.25
LYSMD3Q7Z3D4 AC125232.1-201ENST00000452554 1408 ntBASIC7.24□□□□□ -1.25
LYSMD3Q7Z3D4 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LYSMD3Q7Z3D4 AC104581.5-201ENST00000624171 7141 ntBASIC7.24□□□□□ -1.25
LYSMD3Q7Z3D4 AC073342.2-201ENST00000595842 1800 ntBASIC7.24□□□□□ -1.25
LYSMD3Q7Z3D4 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LYSMD3Q7Z3D4 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
LYSMD3Q7Z3D4 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LYSMD3Q7Z3D4 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
LYSMD3Q7Z3D4 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LYSMD3Q7Z3D4 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 ICE2P1-201ENST00000512800 1849 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 RNU4-81P-201ENST00000363561 144 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 Y_RNA.459-201ENST00000384251 102 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 RNU6-1055P-201ENST00000391085 107 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AL161909.1-201ENST00000397390 712 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AL354719.1-201ENST00000406535 843 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AL603766.1-201ENST00000407763 664 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AL161742.1-201ENST00000418154 584 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 CYP4F34P-201ENST00000425951 481 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC127526.2-201ENST00000426436 775 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC024082.2-201ENST00000434771 238 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 RPL37P21-201ENST00000435890 276 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 MRPL50P4-201ENST00000446432 475 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC021146.2-201ENST00000504736 556 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC008868.1-201ENST00000509786 737 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 MIR1273F-201ENST00000580581 99 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC011193.2-201ENST00000582638 367 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 DYNLL1P1-201ENST00000595442 269 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC018695.5-201ENST00000605872 315 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 RMST_3.1-201ENST00000611651 109 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 RPL23AP61-201ENST00000623642 466 ntBASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
LYSMD3Q7Z3D4 AC022819.1-201ENST00000563495 3910 ntBASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 OR5P1P-201ENST00000299512 925 ntBASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 RPS24P12-201ENST00000402084 394 ntBASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 AL451061.1-201ENST00000407887 862 ntBASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 RN7SKP30-201ENST00000411373 334 ntBASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 AC013404.1-201ENST00000413068 249 ntBASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 AL592293.2-201ENST00000422292 996 ntBASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 AC006065.1-201ENST00000422539 802 ntBASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 BX890604.2-201ENST00000427883 474 ntBASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 AC239800.1-201ENST00000442049 719 ntBASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 AC079448.1-201ENST00000449377 373 ntBASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 OR7E7P-201ENST00000455678 1012 ntBASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC7.22□□□□□ -1.25
LYSMD3Q7Z3D4 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms