Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SNORA43.1-201ENST00000364863 140 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 MIR433-201ENST00000384837 93 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 GTF2IP5-201ENST00000414608 731 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 RPL22P18-201ENST00000417197 377 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 RPS3AP37-201ENST00000419176 745 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AL513175.2-201ENST00000422071 443 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 OR5AW1P-201ENST00000426334 1006 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC084290.1-201ENST00000434995 374 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AL445665.1-202ENST00000452436 324 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 RPS6P2-201ENST00000454208 705 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC112187.1-201ENST00000455837 479 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 RNU7-140P-201ENST00000459546 60 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 RPL7L1P4-201ENST00000513004 707 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC108471.1-201ENST00000513977 287 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC112191.2-201ENST00000522428 333 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 WBP1LP3-201ENST00000523033 208 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 ZNF322P1-201ENST00000568013 1209 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 SNORD95-201ENST00000579879 68 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AP001267.4-201ENST00000602598 545 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 RN7SL787P-201ENST00000613000 284 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC073869.7-201ENST00000640874 297 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC116667.2-201ENST00000641075 823 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC140134.1-201ENST00000511830 3544 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 MTND4P31-201ENST00000425607 1343 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AC123769.1-201ENST00000530992 3192 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AL731532.1-201ENST00000623972 4236 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 RNU4-22P-201ENST00000411058 166 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AC245060.4-201ENST00000413293 1121 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AL096829.1-201ENST00000413677 457 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 RPL12P28-201ENST00000430852 489 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 CDY14P-201ENST00000431260 1014 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 FTLP19-201ENST00000433300 394 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 CDY12P-201ENST00000440679 1015 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AC064862.4-201ENST00000442180 334 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 CDY13P-201ENST00000445813 1015 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 CDY23P-201ENST00000451661 1014 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AC091860.1-201ENST00000505723 432 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AP000648.1-201ENST00000529682 397 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AL031601.1-201ENST00000605702 394 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AC022467.1-201ENST00000614738 749 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 Z99129.2-201ENST00000619967 314 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 OR7A1P-202ENST00000641542 1158 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 CCNT2P1-201ENST00000423082 1315 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 KYNUP3-201ENST00000574386 1341 ntBASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC144BQ3MJ40 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms