Protein–RNA interactions for Protein: P78317

RNF4, E3 ubiquitin-protein ligase RNF4, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4P78317 AC091849.1-201ENST00000509920 121 ntBASIC6.26□□□□□ -1.41
RNF4P78317 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF4P78317 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF4P78317 HMGB1P23-201ENST00000518743 568 ntBASIC6.26□□□□□ -1.41
RNF4P78317 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF4P78317 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF4P78317 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF4P78317 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF4P78317 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF4P78317 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF4P78317 AC023310.2-201ENST00000553844 547 ntBASIC6.26□□□□□ -1.41
RNF4P78317 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF4P78317 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF4P78317 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF4P78317 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF4P78317 AC012065.4-201ENST00000602445 679 ntBASIC6.26□□□□□ -1.41
RNF4P78317 AC036176.3-201ENST00000602456 418 ntBASIC6.26□□□□□ -1.41
RNF4P78317 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.26□□□□□ -1.41
RNF4P78317 AC090525.3-201ENST00000605601 189 ntBASIC6.26□□□□□ -1.41
RNF4P78317 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
RNF4P78317 AC131009.3-201ENST00000621809 287 ntBASIC6.26□□□□□ -1.41
RNF4P78317 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF4P78317 CASC19-264ENST00000641912 1184 ntBASIC6.26□□□□□ -1.41
RNF4P78317 OR5H6-203ENST00000642105 978 ntBASIC6.26□□□□□ -1.41
RNF4P78317 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF4P78317 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.26□□□□□ -1.41
RNF4P78317 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
RNF4P78317 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF4P78317 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF4P78317 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF4P78317 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
RNF4P78317 TEX21P-201ENST00000447107 1476 ntBASIC6.26□□□□□ -1.41
RNF4P78317 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF4P78317 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF4P78317 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF4P78317 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
RNF4P78317 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.26□□□□□ -1.41
RNF4P78317 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF4P78317 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF4P78317 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF4P78317 AP003486.1-201ENST00000525716 3994 ntBASIC6.25□□□□□ -1.41
RNF4P78317 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
RNF4P78317 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF4P78317 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RNF4P78317 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF4P78317 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF4P78317 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RNF4P78317 RNU4-7P-201ENST00000364758 141 ntBASIC6.25□□□□□ -1.41
RNF4P78317 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF4P78317 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF4P78317 UBTFL3-201ENST00000418934 1024 ntBASIC6.25□□□□□ -1.41
RNF4P78317 AC092647.1-201ENST00000420654 287 ntBASIC6.25□□□□□ -1.41
RNF4P78317 CDC42P6-201ENST00000421246 576 ntBASIC6.25□□□□□ -1.41
RNF4P78317 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF4P78317 RPL23AP4-201ENST00000427757 463 ntBASIC6.25□□□□□ -1.41
RNF4P78317 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.25□□□□□ -1.41
RNF4P78317 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF4P78317 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF4P78317 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF4P78317 AL512593.1-201ENST00000444758 779 ntBASIC6.25□□□□□ -1.41
RNF4P78317 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF4P78317 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
RNF4P78317 UBTFL6-201ENST00000477929 1024 ntBASIC6.25□□□□□ -1.41
RNF4P78317 TMED11P-201ENST00000479478 690 ntBASIC6.25□□□□□ -1.41
RNF4P78317 RN7SL37P-201ENST00000490461 307 ntBASIC6.25□□□□□ -1.41
RNF4P78317 AC023818.1-201ENST00000498379 384 ntBASIC6.25□□□□□ -1.41
RNF4P78317 MYL12BP2-201ENST00000503948 512 ntBASIC6.25□□□□□ -1.41
RNF4P78317 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.25□□□□□ -1.41
RNF4P78317 AC091874.2-201ENST00000505889 720 ntBASIC6.25□□□□□ -1.41
RNF4P78317 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF4P78317 AC096754.1-201ENST00000508904 818 ntBASIC6.25□□□□□ -1.41
RNF4P78317 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF4P78317 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF4P78317 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF4P78317 RN7SKP196-201ENST00000516267 345 ntBASIC6.25□□□□□ -1.41
RNF4P78317 RNU6-506P-201ENST00000516553 94 ntBASIC6.25□□□□□ -1.41
RNF4P78317 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.25□□□□□ -1.41
RNF4P78317 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF4P78317 OR5AK1P-201ENST00000524837 922 ntBASIC6.25□□□□□ -1.41
RNF4P78317 OR4R3P-201ENST00000525084 838 ntBASIC6.25□□□□□ -1.41
RNF4P78317 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF4P78317 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.25□□□□□ -1.41
RNF4P78317 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF4P78317 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF4P78317 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF4P78317 SERPINE4P-201ENST00000554978 281 ntBASIC6.25□□□□□ -1.41
RNF4P78317 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF4P78317 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF4P78317 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF4P78317 ANP32BP1-202ENST00000568553 737 ntBASIC6.25□□□□□ -1.41
RNF4P78317 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.25□□□□□ -1.41
RNF4P78317 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF4P78317 SS18L2P2-201ENST00000583960 235 ntBASIC6.25□□□□□ -1.41
RNF4P78317 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF4P78317 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF4P78317 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF4P78317 RPL7AP69-201ENST00000595306 806 ntBASIC6.25□□□□□ -1.41
RNF4P78317 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF4P78317 AC024560.3-201ENST00000608482 349 ntBASIC6.25□□□□□ -1.41
RNF4P78317 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms