Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.37□□□□□ -1.71
LMO4P61968 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
LMO4P61968 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LMO4P61968 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
LMO4P61968 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.37□□□□□ -1.71
LMO4P61968 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LMO4P61968 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
LMO4P61968 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LMO4P61968 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LMO4P61968 MIR7-1-201ENST00000384871 110 ntBASIC4.37□□□□□ -1.71
LMO4P61968 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LMO4P61968 U3.28-201ENST00000391249 210 ntBASIC4.37□□□□□ -1.71
LMO4P61968 CHMP1B2P-201ENST00000399581 597 ntBASIC4.37□□□□□ -1.71
LMO4P61968 PPIAP9-201ENST00000403866 498 ntBASIC4.37□□□□□ -1.71
LMO4P61968 CYP2AC1P-201ENST00000407830 1173 ntBASIC4.37□□□□□ -1.71
LMO4P61968 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 RPS26P13-201ENST00000419030 330 ntBASIC4.37□□□□□ -1.71
LMO4P61968 RPS4XP16-201ENST00000427198 791 ntBASIC4.37□□□□□ -1.71
LMO4P61968 Z80107.1-201ENST00000436830 412 ntBASIC4.37□□□□□ -1.71
LMO4P61968 ARAFP2-201ENST00000440565 559 ntBASIC4.37□□□□□ -1.71
LMO4P61968 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.37□□□□□ -1.71
LMO4P61968 EIF2S2P4-201ENST00000461070 984 ntBASIC4.37□□□□□ -1.71
LMO4P61968 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.37□□□□□ -1.71
LMO4P61968 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 OR9N1P-201ENST00000491296 333 ntBASIC4.37□□□□□ -1.71
LMO4P61968 RPS23P1-201ENST00000491662 432 ntBASIC4.37□□□□□ -1.71
LMO4P61968 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.37□□□□□ -1.71
LMO4P61968 AC016550.1-201ENST00000505348 785 ntBASIC4.37□□□□□ -1.71
LMO4P61968 GLUD1P3-202ENST00000508551 200 ntBASIC4.37□□□□□ -1.71
LMO4P61968 AC025768.1-201ENST00000510057 267 ntBASIC4.37□□□□□ -1.71
LMO4P61968 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.37□□□□□ -1.71
LMO4P61968 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.37□□□□□ -1.71
LMO4P61968 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.37□□□□□ -1.71
LMO4P61968 RN7SKP147-201ENST00000517154 244 ntBASIC4.37□□□□□ -1.71
LMO4P61968 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.37□□□□□ -1.71
LMO4P61968 AC012400.1-201ENST00000518452 381 ntBASIC4.37□□□□□ -1.71
LMO4P61968 OR7E10P-201ENST00000526420 991 ntBASIC4.37□□□□□ -1.71
LMO4P61968 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.37□□□□□ -1.71
LMO4P61968 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.37□□□□□ -1.71
LMO4P61968 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.37□□□□□ -1.71
LMO4P61968 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.37□□□□□ -1.71
LMO4P61968 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.37□□□□□ -1.71
LMO4P61968 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.37□□□□□ -1.71
LMO4P61968 MIR4700-201ENST00000578311 74 ntBASIC4.37□□□□□ -1.71
LMO4P61968 AC006116.5-201ENST00000591936 559 ntBASIC4.37□□□□□ -1.71
LMO4P61968 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.37□□□□□ -1.71
LMO4P61968 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.37□□□□□ -1.71
LMO4P61968 AC116651.1-201ENST00000609724 556 ntBASIC4.37□□□□□ -1.71
LMO4P61968 AC015922.4-201ENST00000612568 690 ntBASIC4.37□□□□□ -1.71
LMO4P61968 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.37□□□□□ -1.71
LMO4P61968 AP003485.1-201ENST00000625093 753 ntBASIC4.37□□□□□ -1.71
LMO4P61968 OR4G3P-201ENST00000633500 913 ntBASIC4.37□□□□□ -1.71
LMO4P61968 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.37□□□□□ -1.71
LMO4P61968 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.37□□□□□ -1.71
LMO4P61968 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 AC100757.1-201ENST00000616872 1835 ntBASIC4.37□□□□□ -1.71
LMO4P61968 AL356317.1-201ENST00000396110 1436 ntBASIC4.37□□□□□ -1.71
LMO4P61968 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LMO4P61968 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LMO4P61968 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
LMO4P61968 AC103591.2-201ENST00000265259 766 ntBASIC4.36□□□□□ -1.71
LMO4P61968 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 AC007618.1-201ENST00000366455 732 ntBASIC4.36□□□□□ -1.71
LMO4P61968 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.36□□□□□ -1.71
LMO4P61968 AL607077.1-201ENST00000401718 499 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.36□□□□□ -1.71
LMO4P61968 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LMO4P61968 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.36□□□□□ -1.71
LMO4P61968 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LMO4P61968 EI24P4-201ENST00000423683 1078 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.36□□□□□ -1.71
LMO4P61968 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.36□□□□□ -1.71
LMO4P61968 RBMY2QP-201ENST00000429799 1147 ntBASIC4.36□□□□□ -1.71
LMO4P61968 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.36□□□□□ -1.71
LMO4P61968 NDUFB4P8-201ENST00000435351 367 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.36□□□□□ -1.71
LMO4P61968 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 RPL31P20-201ENST00000449593 360 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC097484.1-201ENST00000471148 389 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms