Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
ACTBP60709 AC010809.3-201ENST00000621310 641 ntBASIC4.47□□□□□ -1.69
ACTBP60709 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.47□□□□□ -1.69
ACTBP60709 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.47□□□□□ -1.69
ACTBP60709 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.47□□□□□ -1.69
ACTBP60709 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
ACTBP60709 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.47□□□□□ -1.69
ACTBP60709 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.47□□□□□ -1.69
ACTBP60709 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.47□□□□□ -1.69
ACTBP60709 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ACTBP60709 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ACTBP60709 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.47□□□□□ -1.69
ACTBP60709 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.46□□□□□ -1.69
ACTBP60709 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
ACTBP60709 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
ACTBP60709 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.46□□□□□ -1.69
ACTBP60709 OR13C1P-202ENST00000641378 2919 ntBASIC4.46□□□□□ -1.69
ACTBP60709 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACTBP60709 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACTBP60709 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
ACTBP60709 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACTBP60709 OR52B1P-201ENST00000316506 909 ntBASIC4.46□□□□□ -1.7
ACTBP60709 RN7SKP292-201ENST00000365522 317 ntBASIC4.46□□□□□ -1.7
ACTBP60709 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ACTBP60709 HSPA8P15-201ENST00000401676 786 ntBASIC4.46□□□□□ -1.7
ACTBP60709 AL390316.1-201ENST00000406279 553 ntBASIC4.46□□□□□ -1.7
ACTBP60709 Z68694.1-201ENST00000413929 841 ntBASIC4.46□□□□□ -1.7
ACTBP60709 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.46□□□□□ -1.7
ACTBP60709 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.46□□□□□ -1.7
ACTBP60709 AC009238.2-201ENST00000431026 355 ntBASIC4.46□□□□□ -1.7
ACTBP60709 AC073109.1-201ENST00000445066 978 ntBASIC4.46□□□□□ -1.7
ACTBP60709 RPL36AP39-201ENST00000445859 318 ntBASIC4.46□□□□□ -1.7
ACTBP60709 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.46□□□□□ -1.7
ACTBP60709 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.46□□□□□ -1.7
ACTBP60709 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.46□□□□□ -1.7
ACTBP60709 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
ACTBP60709 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.46□□□□□ -1.7
ACTBP60709 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.46□□□□□ -1.7
ACTBP60709 HMGB1P44-201ENST00000508597 572 ntBASIC4.46□□□□□ -1.7
ACTBP60709 AC090568.1-201ENST00000509499 856 ntBASIC4.46□□□□□ -1.7
ACTBP60709 AC027308.1-201ENST00000517993 110 ntBASIC4.46□□□□□ -1.7
ACTBP60709 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.46□□□□□ -1.7
ACTBP60709 AC112191.2-201ENST00000522428 333 ntBASIC4.46□□□□□ -1.7
ACTBP60709 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.46□□□□□ -1.7
ACTBP60709 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ACTBP60709 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.46□□□□□ -1.7
ACTBP60709 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
ACTBP60709 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.46□□□□□ -1.7
ACTBP60709 AC010547.6-201ENST00000571789 193 ntBASIC4.46□□□□□ -1.7
ACTBP60709 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACTBP60709 AC008521.2-201ENST00000591021 259 ntBASIC4.46□□□□□ -1.7
ACTBP60709 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.46□□□□□ -1.7
ACTBP60709 AC005252.1-201ENST00000604518 1063 ntBASIC4.46□□□□□ -1.7
ACTBP60709 AC015982.1-201ENST00000608113 465 ntBASIC4.46□□□□□ -1.7
ACTBP60709 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.46□□□□□ -1.7
ACTBP60709 AC008115.3-201ENST00000614874 549 ntBASIC4.46□□□□□ -1.7
ACTBP60709 MIR8069-1-201ENST00000616627 86 ntBASIC4.46□□□□□ -1.7
ACTBP60709 MIR8069-2-201ENST00000621412 86 ntBASIC4.46□□□□□ -1.7
ACTBP60709 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.46□□□□□ -1.7
ACTBP60709 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.46□□□□□ -1.7
ACTBP60709 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.46□□□□□ -1.7
ACTBP60709 AC008691.1-209ENST00000642094 814 ntBASIC4.46□□□□□ -1.7
ACTBP60709 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACTBP60709 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ACTBP60709 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.46□□□□□ -1.7
ACTBP60709 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
ACTBP60709 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACTBP60709 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
ACTBP60709 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
ACTBP60709 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
ACTBP60709 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACTBP60709 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
ACTBP60709 SCARNA15-201ENST00000607520 4325 ntBASIC4.45□□□□□ -1.7
ACTBP60709 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
ACTBP60709 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACTBP60709 AC126323.6-202ENST00000568092 3511 ntBASIC4.45□□□□□ -1.7
ACTBP60709 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
ACTBP60709 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACTBP60709 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.45□□□□□ -1.7
ACTBP60709 ASNSP1-201ENST00000518311 1939 ntBASIC4.45□□□□□ -1.7
ACTBP60709 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.45□□□□□ -1.7
ACTBP60709 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ACTBP60709 RNA5SP122-201ENST00000384457 108 ntBASIC4.45□□□□□ -1.7
ACTBP60709 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
ACTBP60709 AL035079.1-201ENST00000405210 287 ntBASIC4.45□□□□□ -1.7
ACTBP60709 SDHDP6-201ENST00000414693 480 ntBASIC4.45□□□□□ -1.7
ACTBP60709 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.45□□□□□ -1.7
ACTBP60709 EIF4A1P1-201ENST00000420241 934 ntBASIC4.45□□□□□ -1.7
ACTBP60709 AL133173.1-201ENST00000423458 397 ntBASIC4.45□□□□□ -1.7
ACTBP60709 AC079807.1-201ENST00000429993 481 ntBASIC4.45□□□□□ -1.7
ACTBP60709 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.45□□□□□ -1.7
ACTBP60709 SUMO2P3-201ENST00000438311 288 ntBASIC4.45□□□□□ -1.7
ACTBP60709 AC064862.4-201ENST00000442180 334 ntBASIC4.45□□□□□ -1.7
ACTBP60709 RPL31P15-201ENST00000449770 338 ntBASIC4.45□□□□□ -1.7
ACTBP60709 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ACTBP60709 AC093166.2-201ENST00000455969 1017 ntBASIC4.45□□□□□ -1.7
ACTBP60709 LDHBP2-201ENST00000456969 1005 ntBASIC4.45□□□□□ -1.7
ACTBP60709 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.45□□□□□ -1.7
ACTBP60709 AC112206.1-201ENST00000468416 477 ntBASIC4.45□□□□□ -1.7
ACTBP60709 RN7SL423P-201ENST00000486202 304 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms