Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH12P55289 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH12P55289 AC021106.1-201ENST00000509020 1058 ntBASIC5.13□□□□□ -1.59
CDH12P55289 ASNSP4-201ENST00000511103 447 ntBASIC5.13□□□□□ -1.59
CDH12P55289 AC091912.1-201ENST00000511351 248 ntBASIC5.13□□□□□ -1.59
CDH12P55289 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH12P55289 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH12P55289 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.13□□□□□ -1.59
CDH12P55289 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH12P55289 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH12P55289 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CDH12P55289 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 AC106734.1-201ENST00000568646 663 ntBASIC5.13□□□□□ -1.59
CDH12P55289 AC016839.1-201ENST00000578162 867 ntBASIC5.13□□□□□ -1.59
CDH12P55289 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH12P55289 RNU6-84P-201ENST00000607737 102 ntBASIC5.13□□□□□ -1.59
CDH12P55289 AC073593.1-201ENST00000624500 411 ntBASIC5.13□□□□□ -1.59
CDH12P55289 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH12P55289 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH12P55289 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 AC007382.1-201ENST00000624376 2618 ntBASIC5.13□□□□□ -1.59
CDH12P55289 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH12P55289 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH12P55289 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH12P55289 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CDH12P55289 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH12P55289 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH12P55289 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CDH12P55289 LINC02019-201ENST00000608605 2060 ntBASIC5.12□□□□□ -1.59
CDH12P55289 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
CDH12P55289 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CDH12P55289 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH12P55289 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDH12P55289 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH12P55289 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 KARSP1-201ENST00000451871 1752 ntBASIC5.12□□□□□ -1.59
CDH12P55289 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH12P55289 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CDH12P55289 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CDH12P55289 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDH12P55289 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 AL672167.2-201ENST00000377164 879 ntBASIC5.12□□□□□ -1.59
CDH12P55289 AC234772.1-201ENST00000377927 937 ntBASIC5.12□□□□□ -1.59
CDH12P55289 RNA5SP241-201ENST00000391326 114 ntBASIC5.12□□□□□ -1.59
CDH12P55289 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH12P55289 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 PEX12P1-201ENST00000400284 1048 ntBASIC5.12□□□□□ -1.59
CDH12P55289 SNORA79B-201ENST00000410557 148 ntBASIC5.12□□□□□ -1.59
CDH12P55289 AL022331.1-201ENST00000429025 477 ntBASIC5.12□□□□□ -1.59
CDH12P55289 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.12□□□□□ -1.59
CDH12P55289 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH12P55289 RPS7P2-201ENST00000435134 607 ntBASIC5.12□□□□□ -1.59
CDH12P55289 MTCYBP29-201ENST00000436327 1006 ntBASIC5.12□□□□□ -1.59
CDH12P55289 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH12P55289 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.12□□□□□ -1.59
CDH12P55289 AL139824.2-201ENST00000458731 1095 ntBASIC5.12□□□□□ -1.59
CDH12P55289 AC020779.1-201ENST00000478757 796 ntBASIC5.12□□□□□ -1.59
CDH12P55289 AC022215.1-201ENST00000481770 362 ntBASIC5.12□□□□□ -1.59
CDH12P55289 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 NENFP3-201ENST00000503735 313 ntBASIC5.12□□□□□ -1.59
CDH12P55289 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH12P55289 SNORA19.3-201ENST00000516165 130 ntBASIC5.12□□□□□ -1.59
CDH12P55289 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH12P55289 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH12P55289 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH12P55289 AL359219.2-201ENST00000555184 348 ntBASIC5.12□□□□□ -1.59
CDH12P55289 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH12P55289 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH12P55289 FAM106CP-201ENST00000582212 507 ntBASIC5.12□□□□□ -1.59
CDH12P55289 H3F3BP2-201ENST00000583907 357 ntBASIC5.12□□□□□ -1.59
CDH12P55289 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH12P55289 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH12P55289 AC009237.13-201ENST00000603193 276 ntBASIC5.12□□□□□ -1.59
CDH12P55289 MIR7109-201ENST00000613748 65 ntBASIC5.12□□□□□ -1.59
CDH12P55289 VN1R9P-201ENST00000614184 867 ntBASIC5.12□□□□□ -1.59
CDH12P55289 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH12P55289 FRG1EP-201ENST00000634469 770 ntBASIC5.12□□□□□ -1.59
CDH12P55289 AC006927.2-201ENST00000639256 389 ntBASIC5.12□□□□□ -1.59
CDH12P55289 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH12P55289 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CDH12P55289 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDH12P55289 AL034549.2-201ENST00000618285 3373 ntBASIC5.12□□□□□ -1.59
CDH12P55289 AL078621.3-201ENST00000623707 2042 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms