Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC084824.2-201ENST00000548906 345 ntBASIC7□□□□□ -1.29
MSH6P52701 GLRXP2-201ENST00000555594 321 ntBASIC7□□□□□ -1.29
MSH6P52701 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7□□□□□ -1.29
MSH6P52701 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7□□□□□ -1.29
MSH6P52701 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7□□□□□ -1.29
MSH6P52701 SSX9-202ENST00000608568 580 ntTSL 4 BASIC7□□□□□ -1.29
MSH6P52701 AC024941.1-201ENST00000612250 334 ntBASIC7□□□□□ -1.29
MSH6P52701 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC7□□□□□ -1.29
MSH6P52701 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
MSH6P52701 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7□□□□□ -1.29
MSH6P52701 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7□□□□□ -1.29
MSH6P52701 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC7□□□□□ -1.29
MSH6P52701 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
MSH6P52701 LARS-201ENST00000274562 2213 ntTSL 2 BASIC7□□□□□ -1.29
MSH6P52701 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
MSH6P52701 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
MSH6P52701 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
MSH6P52701 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC7□□□□□ -1.29
MSH6P52701 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
MSH6P52701 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC7□□□□□ -1.29
MSH6P52701 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
MSH6P52701 AL592148.3-201ENST00000608771 2646 ntBASIC6.99□□□□□ -1.29
MSH6P52701 AC009951.1-201ENST00000623674 2614 ntBASIC6.99□□□□□ -1.29
MSH6P52701 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
MSH6P52701 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
MSH6P52701 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
MSH6P52701 PPIAP9-201ENST00000403866 498 ntBASIC6.99□□□□□ -1.29
MSH6P52701 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
MSH6P52701 AC006065.1-201ENST00000422539 802 ntBASIC6.99□□□□□ -1.29
MSH6P52701 AC124944.2-201ENST00000429866 1242 ntBASIC6.99□□□□□ -1.29
MSH6P52701 RPL12P28-201ENST00000430852 489 ntBASIC6.99□□□□□ -1.29
MSH6P52701 AC099670.2-201ENST00000435130 321 ntBASIC6.99□□□□□ -1.29
MSH6P52701 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.99□□□□□ -1.29
MSH6P52701 TDGF1P1-201ENST00000445734 527 ntBASIC6.99□□□□□ -1.29
MSH6P52701 RN7SL443P-201ENST00000464331 290 ntBASIC6.99□□□□□ -1.29
MSH6P52701 AC034236.1-201ENST00000469891 373 ntBASIC6.99□□□□□ -1.29
MSH6P52701 AC022034.3-201ENST00000471393 478 ntBASIC6.99□□□□□ -1.29
MSH6P52701 AC025674.1-201ENST00000507074 324 ntBASIC6.99□□□□□ -1.29
MSH6P52701 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.99□□□□□ -1.29
MSH6P52701 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.99□□□□□ -1.29
MSH6P52701 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
MSH6P52701 AC093227.2-201ENST00000589357 285 ntBASIC6.99□□□□□ -1.29
MSH6P52701 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
MSH6P52701 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
MSH6P52701 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
MSH6P52701 AC097063.1-201ENST00000426714 1797 ntBASIC6.99□□□□□ -1.29
MSH6P52701 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
MSH6P52701 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.99□□□□□ -1.29
MSH6P52701 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.99□□□□□ -1.29
MSH6P52701 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
MSH6P52701 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
MSH6P52701 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
MSH6P52701 RN7SKP17-201ENST00000411242 351 ntBASIC6.98□□□□□ -1.29
MSH6P52701 GAPDHP49-201ENST00000421421 961 ntBASIC6.98□□□□□ -1.29
MSH6P52701 AL389915.1-201ENST00000422463 466 ntBASIC6.98□□□□□ -1.29
MSH6P52701 AL158073.1-201ENST00000426848 1104 ntBASIC6.98□□□□□ -1.29
MSH6P52701 AC073465.2-201ENST00000440938 498 ntBASIC6.98□□□□□ -1.29
MSH6P52701 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.98□□□□□ -1.29
MSH6P52701 RN7SL189P-201ENST00000468631 289 ntBASIC6.98□□□□□ -1.29
MSH6P52701 NPM1P6-201ENST00000521088 871 ntBASIC6.98□□□□□ -1.29
MSH6P52701 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.98□□□□□ -1.29
MSH6P52701 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.98□□□□□ -1.29
MSH6P52701 AC007224.1-201ENST00000564410 144 ntBASIC6.98□□□□□ -1.29
MSH6P52701 AC069366.1-201ENST00000583159 838 ntBASIC6.98□□□□□ -1.29
MSH6P52701 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.98□□□□□ -1.29
MSH6P52701 AC005191.1-201ENST00000603950 358 ntBASIC6.98□□□□□ -1.29
MSH6P52701 uc_338.7-201ENST00000621834 124 ntBASIC6.98□□□□□ -1.29
MSH6P52701 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.98□□□□□ -1.29
MSH6P52701 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.98□□□□□ -1.29
MSH6P52701 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
MSH6P52701 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.98□□□□□ -1.29
MSH6P52701 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.98□□□□□ -1.29
MSH6P52701 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
MSH6P52701 ZNF652P1-201ENST00000442420 1309 ntBASIC6.98□□□□□ -1.29
MSH6P52701 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
MSH6P52701 AL360270.2-201ENST00000562952 5985 ntBASIC6.98□□□□□ -1.29
MSH6P52701 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
MSH6P52701 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
MSH6P52701 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
MSH6P52701 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.97□□□□□ -1.29
MSH6P52701 SCARNA15-201ENST00000607520 4325 ntBASIC6.97□□□□□ -1.29
MSH6P52701 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
MSH6P52701 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
MSH6P52701 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
MSH6P52701 RN7SKP185-201ENST00000362813 326 ntBASIC6.97□□□□□ -1.29
MSH6P52701 SNORD113.2-201ENST00000364166 89 ntBASIC6.97□□□□□ -1.29
MSH6P52701 AL359837.1-201ENST00000381357 287 ntBASIC6.97□□□□□ -1.29
MSH6P52701 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.97□□□□□ -1.29
MSH6P52701 RPL7P58-201ENST00000402913 758 ntBASIC6.97□□□□□ -1.29
MSH6P52701 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.97□□□□□ -1.29
MSH6P52701 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.97□□□□□ -1.29
MSH6P52701 PSAT1P4-201ENST00000466500 526 ntBASIC6.97□□□□□ -1.29
MSH6P52701 AC093827.1-201ENST00000480094 861 ntBASIC6.97□□□□□ -1.29
MSH6P52701 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.97□□□□□ -1.29
MSH6P52701 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.97□□□□□ -1.29
MSH6P52701 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
MSH6P52701 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
MSH6P52701 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.97□□□□□ -1.29
MSH6P52701 AC004232.3-201ENST00000622977 525 ntBASIC6.97□□□□□ -1.29
MSH6P52701 AC008785.1-201ENST00000624475 456 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms