Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.9□□□□□ -1.62
GTF2A1P52655 NAMPTP1-201ENST00000440465 2514 ntBASIC4.9□□□□□ -1.62
GTF2A1P52655 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
GTF2A1P52655 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
GTF2A1P52655 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
GTF2A1P52655 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GTF2A1P52655 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
GTF2A1P52655 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GTF2A1P52655 AL035079.1-201ENST00000405210 287 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 RPS3AP2-201ENST00000407190 754 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.9□□□□□ -1.63
GTF2A1P52655 NENFP1-201ENST00000419476 466 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.9□□□□□ -1.63
GTF2A1P52655 EIF4HP2-201ENST00000424380 563 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 YWHAEP5-201ENST00000431545 765 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.9□□□□□ -1.63
GTF2A1P52655 RPL7P41-201ENST00000485823 957 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 NACAP5-201ENST00000509863 636 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.9□□□□□ -1.63
GTF2A1P52655 VTA1P2-201ENST00000520205 911 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 AC116917.1-201ENST00000520558 305 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 IGLV3-26-201ENST00000520756 302 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 RPA2P1-201ENST00000556557 721 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.9□□□□□ -1.63
GTF2A1P52655 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.9□□□□□ -1.63
GTF2A1P52655 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.9□□□□□ -1.63
GTF2A1P52655 MIR4311-201ENST00000580794 100 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 MIR6721-201ENST00000617181 87 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 AL359715.5-201ENST00000623431 443 ntBASIC4.9□□□□□ -1.63
GTF2A1P52655 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GTF2A1P52655 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.9□□□□□ -1.63
GTF2A1P52655 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.63
GTF2A1P52655 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
GTF2A1P52655 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GTF2A1P52655 AC134882.1-201ENST00000603738 1676 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GTF2A1P52655 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
GTF2A1P52655 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.89□□□□□ -1.63
GTF2A1P52655 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GTF2A1P52655 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
GTF2A1P52655 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GTF2A1P52655 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GTF2A1P52655 GAPDHP15-201ENST00000398586 975 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 AL009179.1-201ENST00000406085 265 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.89□□□□□ -1.63
GTF2A1P52655 NAP1L4P2-201ENST00000425958 899 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.89□□□□□ -1.63
GTF2A1P52655 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
GTF2A1P52655 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
GTF2A1P52655 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.89□□□□□ -1.63
GTF2A1P52655 ATP5LP2-201ENST00000440646 311 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 RPL5P7-201ENST00000444235 813 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 RBMY2AP-201ENST00000445405 1157 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.89□□□□□ -1.63
GTF2A1P52655 RBMY2CP-201ENST00000448575 1157 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 RBMY2DP-202ENST00000448881 1157 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 NDUFS5P3-201ENST00000450668 321 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 RBMY2BP-202ENST00000451071 1156 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 APOOP2-201ENST00000461561 539 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 RPL29P23-201ENST00000486188 442 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 RN7SL193P-201ENST00000491708 276 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 AC018639.1-201ENST00000492994 442 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 AC139783.2-201ENST00000504847 1145 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 AC112184.1-201ENST00000505179 312 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.89□□□□□ -1.63
GTF2A1P52655 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.89□□□□□ -1.63
GTF2A1P52655 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GTF2A1P52655 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.89□□□□□ -1.63
GTF2A1P52655 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.89□□□□□ -1.63
GTF2A1P52655 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.89□□□□□ -1.63
GTF2A1P52655 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.89□□□□□ -1.63
GTF2A1P52655 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.89□□□□□ -1.63
GTF2A1P52655 AC090236.2-201ENST00000587933 1101 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 AC063977.5-201ENST00000601044 974 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 uc_338.29-201ENST00000615099 168 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 AC108359.1-201ENST00000616451 1211 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GTF2A1P52655 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GTF2A1P52655 AL627171.1-201ENST00000618845 1308 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 Z73965.1-201ENST00000623412 2297 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.89□□□□□ -1.63
GTF2A1P52655 AL359922.3-201ENST00000624779 1670 ntBASIC4.89□□□□□ -1.63
GTF2A1P52655 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.89□□□□□ -1.63
GTF2A1P52655 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 AC023421.1-201ENST00000590535 1785 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 AC027287.1-201ENST00000553115 1453 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
GTF2A1P52655 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
GTF2A1P52655 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
GTF2A1P52655 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
GTF2A1P52655 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
GTF2A1P52655 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 RNA5SP30-201ENST00000365552 115 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms