Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MRE11P49959 RPSAP37-201ENST00000470913 821 ntBASIC6.69□□□□□ -1.34
MRE11P49959 RN7SL369P-201ENST00000477138 299 ntBASIC6.69□□□□□ -1.34
MRE11P49959 RPL38P3-201ENST00000484463 213 ntBASIC6.69□□□□□ -1.34
MRE11P49959 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.69□□□□□ -1.34
MRE11P49959 OR10G5P-201ENST00000532733 358 ntBASIC6.69□□□□□ -1.34
MRE11P49959 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.69□□□□□ -1.34
MRE11P49959 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.69□□□□□ -1.34
MRE11P49959 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.69□□□□□ -1.34
MRE11P49959 AC145350.1-201ENST00000567426 208 ntBASIC6.69□□□□□ -1.34
MRE11P49959 AC023824.3-201ENST00000569003 562 ntBASIC6.69□□□□□ -1.34
MRE11P49959 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.69□□□□□ -1.34
MRE11P49959 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.69□□□□□ -1.34
MRE11P49959 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.69□□□□□ -1.34
MRE11P49959 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.69□□□□□ -1.34
MRE11P49959 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.69□□□□□ -1.34
MRE11P49959 AC091057.2-201ENST00000602594 792 ntBASIC6.69□□□□□ -1.34
MRE11P49959 AL049844.2-201ENST00000604280 628 ntBASIC6.69□□□□□ -1.34
MRE11P49959 MIR6820-201ENST00000611508 62 ntBASIC6.69□□□□□ -1.34
MRE11P49959 AC122108.2-201ENST00000611946 526 ntBASIC6.69□□□□□ -1.34
MRE11P49959 RNU6-1192P-201ENST00000612197 107 ntBASIC6.69□□□□□ -1.34
MRE11P49959 MIR7155-201ENST00000615925 56 ntBASIC6.69□□□□□ -1.34
MRE11P49959 RNU6-489P-201ENST00000618289 107 ntBASIC6.69□□□□□ -1.34
MRE11P49959 AL645927.2-201ENST00000618350 349 ntBASIC6.69□□□□□ -1.34
MRE11P49959 AL669942.2-201ENST00000620352 697 ntBASIC6.69□□□□□ -1.34
MRE11P49959 MIR6811-201ENST00000620409 58 ntBASIC6.69□□□□□ -1.34
MRE11P49959 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.69□□□□□ -1.34
MRE11P49959 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MRE11P49959 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
MRE11P49959 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
MRE11P49959 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.69□□□□□ -1.34
MRE11P49959 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.69□□□□□ -1.34
MRE11P49959 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.69□□□□□ -1.34
MRE11P49959 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MRE11P49959 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
MRE11P49959 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
MRE11P49959 AC083899.1-201ENST00000454465 3819 ntBASIC6.68□□□□□ -1.34
MRE11P49959 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MRE11P49959 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MRE11P49959 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
MRE11P49959 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MRE11P49959 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.68□□□□□ -1.34
MRE11P49959 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.68□□□□□ -1.34
MRE11P49959 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MRE11P49959 MIR421-201ENST00000365696 85 ntBASIC6.68□□□□□ -1.34
MRE11P49959 SNORA56-201ENST00000383966 129 ntBASIC6.68□□□□□ -1.34
MRE11P49959 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.68□□□□□ -1.34
MRE11P49959 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.68□□□□□ -1.34
MRE11P49959 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.68□□□□□ -1.34
MRE11P49959 OSTCP4-201ENST00000424397 449 ntBASIC6.68□□□□□ -1.34
MRE11P49959 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.68□□□□□ -1.34
MRE11P49959 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.68□□□□□ -1.34
MRE11P49959 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.68□□□□□ -1.34
MRE11P49959 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.68□□□□□ -1.34
MRE11P49959 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.68□□□□□ -1.34
MRE11P49959 AL645937.3-201ENST00000453647 936 ntBASIC6.68□□□□□ -1.34
MRE11P49959 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.68□□□□□ -1.34
MRE11P49959 AC098847.1-201ENST00000473094 348 ntBASIC6.68□□□□□ -1.34
MRE11P49959 AP000563.1-201ENST00000490865 758 ntBASIC6.68□□□□□ -1.34
MRE11P49959 AC069304.1-201ENST00000491593 704 ntBASIC6.68□□□□□ -1.34
MRE11P49959 PCNAP1-201ENST00000505363 709 ntBASIC6.68□□□□□ -1.34
MRE11P49959 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6.68□□□□□ -1.34
MRE11P49959 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.68□□□□□ -1.34
MRE11P49959 RNA5SP228-201ENST00000516232 133 ntBASIC6.68□□□□□ -1.34
MRE11P49959 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
MRE11P49959 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.68□□□□□ -1.34
MRE11P49959 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.68□□□□□ -1.34
MRE11P49959 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.68□□□□□ -1.34
MRE11P49959 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.68□□□□□ -1.34
MRE11P49959 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.68□□□□□ -1.34
MRE11P49959 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.68□□□□□ -1.34
MRE11P49959 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MRE11P49959 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.68□□□□□ -1.34
MRE11P49959 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MRE11P49959 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.68□□□□□ -1.34
MRE11P49959 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.68□□□□□ -1.34
MRE11P49959 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
MRE11P49959 AC087565.3-202ENST00000642085 1603 ntBASIC6.68□□□□□ -1.34
MRE11P49959 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
MRE11P49959 ADAM5-202ENST00000399789 1942 ntBASIC6.68□□□□□ -1.34
MRE11P49959 MFSD8-239ENST00000641590 2479 ntBASIC6.68□□□□□ -1.34
MRE11P49959 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MRE11P49959 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MRE11P49959 THAP12P5-201ENST00000405864 2275 ntBASIC6.67□□□□□ -1.34
MRE11P49959 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.67□□□□□ -1.34
MRE11P49959 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MRE11P49959 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.67□□□□□ -1.34
MRE11P49959 OR52B3P-201ENST00000314715 928 ntBASIC6.67□□□□□ -1.34
MRE11P49959 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
MRE11P49959 RNU105B-201ENST00000364478 208 ntBASIC6.67□□□□□ -1.34
MRE11P49959 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.67□□□□□ -1.34
MRE11P49959 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.67□□□□□ -1.34
MRE11P49959 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.67□□□□□ -1.34
MRE11P49959 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.67□□□□□ -1.34
MRE11P49959 RPS15AP30-201ENST00000420976 390 ntBASIC6.67□□□□□ -1.34
MRE11P49959 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MRE11P49959 REREP1Y-201ENST00000422655 198 ntBASIC6.67□□□□□ -1.34
MRE11P49959 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.67□□□□□ -1.34
MRE11P49959 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.67□□□□□ -1.34
MRE11P49959 REREP2Y-201ENST00000439103 200 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms