Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RPL21P136-201ENST00000605378 396 ntBASIC5.56□□□□□ -1.52
HADHAP40939 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.56□□□□□ -1.52
HADHAP40939 RN7SL787P-201ENST00000613000 284 ntBASIC5.56□□□□□ -1.52
HADHAP40939 AC008115.3-201ENST00000614874 549 ntBASIC5.56□□□□□ -1.52
HADHAP40939 AL356274.1-201ENST00000617064 410 ntBASIC5.56□□□□□ -1.52
HADHAP40939 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.56□□□□□ -1.52
HADHAP40939 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.56□□□□□ -1.52
HADHAP40939 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.56□□□□□ -1.52
HADHAP40939 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HADHAP40939 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.56□□□□□ -1.52
HADHAP40939 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HADHAP40939 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.56□□□□□ -1.52
HADHAP40939 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HADHAP40939 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HADHAP40939 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.56□□□□□ -1.52
HADHAP40939 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HADHAP40939 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.56□□□□□ -1.52
HADHAP40939 AC112198.2-201ENST00000426589 6996 ntBASIC5.56□□□□□ -1.52
HADHAP40939 AC002525.1-201ENST00000624392 1622 ntBASIC5.56□□□□□ -1.52
HADHAP40939 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HADHAP40939 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HADHAP40939 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.55□□□□□ -1.52
HADHAP40939 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HADHAP40939 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HADHAP40939 AC068446.1-201ENST00000556425 1549 ntBASIC5.55□□□□□ -1.52
HADHAP40939 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HADHAP40939 RN7SKP6-201ENST00000364795 319 ntBASIC5.55□□□□□ -1.52
HADHAP40939 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HADHAP40939 CHMP1B2P-201ENST00000399581 597 ntBASIC5.55□□□□□ -1.52
HADHAP40939 RN7SKP229-201ENST00000410465 302 ntBASIC5.55□□□□□ -1.52
HADHAP40939 AC079355.1-201ENST00000421770 223 ntBASIC5.55□□□□□ -1.52
HADHAP40939 AL133173.1-201ENST00000423458 397 ntBASIC5.55□□□□□ -1.52
HADHAP40939 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HADHAP40939 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.55□□□□□ -1.52
HADHAP40939 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.55□□□□□ -1.52
HADHAP40939 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.55□□□□□ -1.52
HADHAP40939 AC002504.1-201ENST00000438281 691 ntBASIC5.55□□□□□ -1.52
HADHAP40939 EEF1B2P6-201ENST00000445713 673 ntBASIC5.55□□□□□ -1.52
HADHAP40939 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.55□□□□□ -1.52
HADHAP40939 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.55□□□□□ -1.52
HADHAP40939 AL450023.1-201ENST00000450868 751 ntBASIC5.55□□□□□ -1.52
HADHAP40939 YWHAEP1-201ENST00000453697 763 ntBASIC5.55□□□□□ -1.52
HADHAP40939 AP000547.1-201ENST00000454360 617 ntBASIC5.55□□□□□ -1.52
HADHAP40939 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.55□□□□□ -1.52
HADHAP40939 RN7SL214P-201ENST00000487317 265 ntBASIC5.55□□□□□ -1.52
HADHAP40939 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HADHAP40939 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.55□□□□□ -1.52
HADHAP40939 AC138866.2-201ENST00000508650 584 ntBASIC5.55□□□□□ -1.52
HADHAP40939 AC021193.1-201ENST00000511607 420 ntBASIC5.55□□□□□ -1.52
HADHAP40939 AC098976.1-201ENST00000513014 541 ntBASIC5.55□□□□□ -1.52
HADHAP40939 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.55□□□□□ -1.52
HADHAP40939 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.55□□□□□ -1.52
HADHAP40939 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.55□□□□□ -1.52
HADHAP40939 AC103833.1-201ENST00000517442 172 ntBASIC5.55□□□□□ -1.52
HADHAP40939 FTH1P11-201ENST00000517577 551 ntBASIC5.55□□□□□ -1.52
HADHAP40939 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.55□□□□□ -1.52
HADHAP40939 AC022404.1-201ENST00000555320 273 ntBASIC5.55□□□□□ -1.52
HADHAP40939 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.55□□□□□ -1.52
HADHAP40939 MTND4LP25-201ENST00000570218 163 ntBASIC5.55□□□□□ -1.52
HADHAP40939 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.55□□□□□ -1.52
HADHAP40939 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.55□□□□□ -1.52
HADHAP40939 AL645927.2-201ENST00000618350 349 ntBASIC5.55□□□□□ -1.52
HADHAP40939 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HADHAP40939 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
HADHAP40939 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HADHAP40939 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HADHAP40939 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HADHAP40939 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HADHAP40939 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HADHAP40939 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HADHAP40939 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.54□□□□□ -1.52
HADHAP40939 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HADHAP40939 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HADHAP40939 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HADHAP40939 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.54□□□□□ -1.52
HADHAP40939 CIR1P2-201ENST00000514821 1342 ntBASIC5.54□□□□□ -1.52
HADHAP40939 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
HADHAP40939 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.54□□□□□ -1.52
HADHAP40939 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.54□□□□□ -1.52
HADHAP40939 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HADHAP40939 NXF4-202ENST00000416098 1465 ntBASIC5.54□□□□□ -1.52
HADHAP40939 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HADHAP40939 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HADHAP40939 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.54□□□□□ -1.52
HADHAP40939 RNA5SP242-201ENST00000364171 118 ntBASIC5.54□□□□□ -1.52
HADHAP40939 RNU4-2-201ENST00000365668 141 ntBASIC5.54□□□□□ -1.52
HADHAP40939 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.54□□□□□ -1.52
HADHAP40939 RNA5SP187-201ENST00000384400 119 ntBASIC5.54□□□□□ -1.52
HADHAP40939 SNORD56.6-201ENST00000384569 71 ntBASIC5.54□□□□□ -1.52
HADHAP40939 EI24P3-201ENST00000399046 1062 ntBASIC5.54□□□□□ -1.52
HADHAP40939 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.54□□□□□ -1.52
HADHAP40939 AL390879.2-203ENST00000426943 1121 ntBASIC5.54□□□□□ -1.52
HADHAP40939 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.54□□□□□ -1.52
HADHAP40939 RPL17P35-201ENST00000432217 549 ntBASIC5.54□□□□□ -1.52
HADHAP40939 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.54□□□□□ -1.52
HADHAP40939 AP000936.3-201ENST00000438127 255 ntBASIC5.54□□□□□ -1.52
HADHAP40939 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.54□□□□□ -1.52
HADHAP40939 RPL5P25-201ENST00000441148 775 ntBASIC5.54□□□□□ -1.52
HADHAP40939 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.54□□□□□ -1.52
HADHAP40939 AC022431.1-201ENST00000450941 438 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms