Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RORAP35398 RLIMP2-201ENST00000427891 1563 ntBASIC5.01□□□□□ -1.61
RORAP35398 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.01□□□□□ -1.61
RORAP35398 MIR105-1-201ENST00000385222 81 ntBASIC5.01□□□□□ -1.61
RORAP35398 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 AL645733.1-201ENST00000402250 217 ntBASIC5.01□□□□□ -1.61
RORAP35398 AL589647.1-201ENST00000402485 466 ntBASIC5.01□□□□□ -1.61
RORAP35398 NUDT19P3-201ENST00000404698 555 ntBASIC5.01□□□□□ -1.61
RORAP35398 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.01□□□□□ -1.61
RORAP35398 RN7SKP126-201ENST00000411143 300 ntBASIC5.01□□□□□ -1.61
RORAP35398 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.01□□□□□ -1.61
RORAP35398 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.01□□□□□ -1.61
RORAP35398 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.01□□□□□ -1.61
RORAP35398 VN1R54P-201ENST00000435210 1049 ntBASIC5.01□□□□□ -1.61
RORAP35398 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.01□□□□□ -1.61
RORAP35398 RN7SL97P-201ENST00000486780 299 ntBASIC5.01□□□□□ -1.61
RORAP35398 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.01□□□□□ -1.61
RORAP35398 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.01□□□□□ -1.61
RORAP35398 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.01□□□□□ -1.61
RORAP35398 AP006245.2-201ENST00000522004 300 ntBASIC5.01□□□□□ -1.61
RORAP35398 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.01□□□□□ -1.61
RORAP35398 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.01□□□□□ -1.61
RORAP35398 MIR3936-201ENST00000584304 110 ntBASIC5.01□□□□□ -1.61
RORAP35398 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.01□□□□□ -1.61
RORAP35398 AC124856.1-201ENST00000600819 896 ntBASIC5.01□□□□□ -1.61
RORAP35398 AC009027.1-201ENST00000604510 479 ntBASIC5.01□□□□□ -1.61
RORAP35398 AC133644.2-201ENST00000608142 540 ntBASIC5.01□□□□□ -1.61
RORAP35398 AC244107.2-201ENST00000611773 76 ntBASIC5.01□□□□□ -1.61
RORAP35398 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
RORAP35398 AC099494.2-201ENST00000623371 978 ntBASIC5.01□□□□□ -1.61
RORAP35398 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.01□□□□□ -1.61
RORAP35398 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RORAP35398 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.01□□□□□ -1.61
RORAP35398 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RORAP35398 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.01□□□□□ -1.61
RORAP35398 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RORAP35398 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 OSBPL9P1-201ENST00000604744 1469 ntBASIC5□□□□□ -1.61
RORAP35398 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RORAP35398 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RORAP35398 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RORAP35398 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5□□□□□ -1.61
RORAP35398 AC073429.2-201ENST00000569694 1444 ntBASIC5□□□□□ -1.61
RORAP35398 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
RORAP35398 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5□□□□□ -1.61
RORAP35398 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5□□□□□ -1.61
RORAP35398 AL109941.1-201ENST00000401925 229 ntBASIC5□□□□□ -1.61
RORAP35398 AL133270.1-201ENST00000402635 279 ntBASIC5□□□□□ -1.61
RORAP35398 RN7SKP97-201ENST00000410966 333 ntBASIC5□□□□□ -1.61
RORAP35398 AC211486.3-201ENST00000412694 621 ntBASIC5□□□□□ -1.61
RORAP35398 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5□□□□□ -1.61
RORAP35398 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5□□□□□ -1.61
RORAP35398 VN1R96P-201ENST00000446052 858 ntBASIC5□□□□□ -1.61
RORAP35398 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5□□□□□ -1.61
RORAP35398 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5□□□□□ -1.61
RORAP35398 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5□□□□□ -1.61
RORAP35398 AP000797.2-201ENST00000475768 606 ntBASIC5□□□□□ -1.61
RORAP35398 AC016687.1-201ENST00000482574 353 ntBASIC5□□□□□ -1.61
RORAP35398 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5□□□□□ -1.61
RORAP35398 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5□□□□□ -1.61
RORAP35398 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5□□□□□ -1.61
RORAP35398 AC013701.1-201ENST00000522657 465 ntBASIC5□□□□□ -1.61
RORAP35398 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5□□□□□ -1.61
RORAP35398 AC092490.3-201ENST00000545370 572 ntBASIC5□□□□□ -1.61
RORAP35398 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5□□□□□ -1.61
RORAP35398 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5□□□□□ -1.61
RORAP35398 AL390726.5-202ENST00000564800 256 ntBASIC5□□□□□ -1.61
RORAP35398 MIR4646-201ENST00000580775 63 ntBASIC5□□□□□ -1.61
RORAP35398 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5□□□□□ -1.61
RORAP35398 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5□□□□□ -1.61
RORAP35398 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5□□□□□ -1.61
RORAP35398 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
RORAP35398 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5□□□□□ -1.61
RORAP35398 AC092747.4-201ENST00000620519 1861 ntBASIC5□□□□□ -1.61
RORAP35398 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
RORAP35398 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
RORAP35398 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
RORAP35398 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5□□□□□ -1.61
RORAP35398 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RORAP35398 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RORAP35398 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RORAP35398 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RORAP35398 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RORAP35398 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RORAP35398 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
RORAP35398 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RORAP35398 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RORAP35398 AC079298.1-201ENST00000625026 1619 ntBASIC4.99□□□□□ -1.61
RORAP35398 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.99□□□□□ -1.61
RORAP35398 U3.3-201ENST00000362986 216 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms