Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 YWHAZP2-201ENST00000440317 728 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 RPL23AP24-201ENST00000458203 385 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 RPL36AP41-201ENST00000493820 306 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A5P29400 OR8Q1P-201ENST00000526467 655 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.81□□□□□ -1.48
COL4A5P29400 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.81□□□□□ -1.48
COL4A5P29400 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A5P29400 AC007224.1-201ENST00000564410 144 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A5P29400 AC022884.2-201ENST00000578535 580 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.81□□□□□ -1.48
COL4A5P29400 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A5P29400 AC114781.5-201ENST00000615297 108 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 AC007998.4-201ENST00000612496 2533 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A5P29400 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A5P29400 AC097063.1-201ENST00000426714 1797 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 AL033543.1-201ENST00000623440 13454 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A5P29400 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A5P29400 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A5P29400 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A5P29400 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A5P29400 SNORA73.1-201ENST00000363107 205 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A5P29400 RPL23AP59-201ENST00000399415 461 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.8□□□□□ -1.48
COL4A5P29400 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A5P29400 LINC00993-201ENST00000420453 540 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 OR4C10P-201ENST00000434991 931 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A5P29400 TDGF1P1-201ENST00000445734 527 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 EEF1A1P1-201ENST00000447052 739 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 CYCSP34-201ENST00000458172 304 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A5P29400 MTND4LP2-201ENST00000502312 285 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 AC027369.5-201ENST00000533838 755 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 AC084783.1-201ENST00000565846 910 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A5P29400 AC002044.3-201ENST00000623314 541 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A5P29400 TLK1P1-201ENST00000456760 2440 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.8□□□□□ -1.48
COL4A5P29400 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A5P29400 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A5P29400 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A5P29400 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.8□□□□□ -1.48
COL4A5P29400 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
COL4A5P29400 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC5.8□□□□□ -1.48
COL4A5P29400 PRNCR1-201ENST00000635449 12727 ntBASIC5.8□□□□□ -1.48
COL4A5P29400 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A5P29400 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A5P29400 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A5P29400 SAMMSON-210ENST00000641260 1308 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A5P29400 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC5.79□□□□□ -1.48
COL4A5P29400 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A5P29400 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A5P29400 SNORA11C-201ENST00000408532 129 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.79□□□□□ -1.48
COL4A5P29400 AL359073.1-201ENST00000448036 403 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A5P29400 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.79□□□□□ -1.48
COL4A5P29400 MTCO1P35-201ENST00000515270 228 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.79□□□□□ -1.48
COL4A5P29400 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.79□□□□□ -1.48
COL4A5P29400 RN7SL290P-201ENST00000578661 300 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.79□□□□□ -1.48
COL4A5P29400 MIR92B-201ENST00000607575 96 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 AP000843.1-201ENST00000624880 701 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 AL049536.1-201ENST00000625043 744 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
COL4A5P29400 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
COL4A5P29400 SOCS5P3-201ENST00000425115 1576 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A5P29400 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.79□□□□□ -1.48
COL4A5P29400 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COL4A5P29400 SMG1P7-201ENST00000565246 2704 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.79□□□□□ -1.48
COL4A5P29400 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A5P29400 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A5P29400 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A5P29400 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
COL4A5P29400 AL122126.1-201ENST00000546905 1318 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A5P29400 RNU1-13P-201ENST00000384499 162 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 SNORA48.7-201ENST00000391302 135 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.79□□□□□ -1.48
COL4A5P29400 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A5P29400 AC140479.3-201ENST00000418944 1126 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 RPL21P129-201ENST00000491732 478 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 HMGB1P23-201ENST00000518743 568 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A5P29400 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.79□□□□□ -1.48
COL4A5P29400 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.79□□□□□ -1.48
COL4A5P29400 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms