Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MIR6798-201ENST00000612887 67 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGA1P17096 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGA1P17096 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGA1P17096 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGA1P17096 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGA1P17096 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGA1P17096 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGA1P17096 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGA1P17096 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HMGA1P17096 AC018628.1-201ENST00000624147 3819 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HMGA1P17096 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGA1P17096 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HMGA1P17096 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
HMGA1P17096 MIR133A2-201ENST00000347538 102 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 QRSL1P2-201ENST00000418582 964 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 AL645608.4-201ENST00000423619 154 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 HMGB1P32-201ENST00000425971 565 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 NIPA2P1-201ENST00000426223 976 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGA1P17096 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGA1P17096 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGA1P17096 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 AC009220.1-201ENST00000451614 275 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGA1P17096 RPL23AP72-201ENST00000492447 435 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
HMGA1P17096 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 AC008758.3-201ENST00000507003 1829 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.1□□□□□ -1.59
HMGA1P17096 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGA1P17096 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.1□□□□□ -1.59
HMGA1P17096 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 GSTP1P1-201ENST00000548078 319 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGA1P17096 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGA1P17096 AC022726.1-201ENST00000587475 207 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HMGA1P17096 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.1□□□□□ -1.59
HMGA1P17096 AC010928.1-201ENST00000592477 1447 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 AC022417.1-201ENST00000624768 1303 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 AC092451.3-201ENST00000625067 1343 ntBASIC5.1□□□□□ -1.59
HMGA1P17096 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGA1P17096 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGA1P17096 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGA1P17096 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGA1P17096 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HMGA1P17096 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGA1P17096 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.09□□□□□ -1.59
HMGA1P17096 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGA1P17096 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGA1P17096 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HMGA1P17096 RPS4XP9-201ENST00000405151 780 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGA1P17096 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGA1P17096 CYCSP11-201ENST00000436426 315 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 AC073052.1-201ENST00000440417 714 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 RPS5P7-201ENST00000456664 608 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 AC010326.1-201ENST00000462726 602 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 RN7SL860P-201ENST00000473738 223 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.09□□□□□ -1.59
HMGA1P17096 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.09□□□□□ -1.59
HMGA1P17096 OR51K1P-201ENST00000510214 950 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGA1P17096 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGA1P17096 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.09□□□□□ -1.59
HMGA1P17096 AL049839.1-201ENST00000556151 657 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 RN7SL690P-201ENST00000582087 240 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 AC209154.1-201ENST00000582156 337 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGA1P17096 AP000919.1-201ENST00000582850 985 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 AC068790.4-201ENST00000602474 263 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 AC098935.2-201ENST00000604222 466 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 MIR6853-201ENST00000619642 74 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 AC243960.7-201ENST00000623532 707 ntBASIC5.09□□□□□ -1.59
HMGA1P17096 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGA1P17096 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGA1P17096 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
HMGA1P17096 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HMGA1P17096 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.09□□□□□ -1.6
HMGA1P17096 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.09□□□□□ -1.6
HMGA1P17096 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
HMGA1P17096 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.09□□□□□ -1.6
HMGA1P17096 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms