Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RPS27AP18-201ENST00000515536 459 ntBASIC5.55□□□□□ -1.52
TPM1P09493 HNRNPRP2-201ENST00000528421 743 ntBASIC5.55□□□□□ -1.52
TPM1P09493 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.55□□□□□ -1.52
TPM1P09493 AL049830.4-201ENST00000555149 351 ntBASIC5.55□□□□□ -1.52
TPM1P09493 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TPM1P09493 AC018552.1-201ENST00000562099 811 ntBASIC5.55□□□□□ -1.52
TPM1P09493 AC116553.2-201ENST00000564203 463 ntBASIC5.55□□□□□ -1.52
TPM1P09493 RPL10P14-201ENST00000565265 298 ntBASIC5.55□□□□□ -1.52
TPM1P09493 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.55□□□□□ -1.52
TPM1P09493 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.55□□□□□ -1.52
TPM1P09493 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.55□□□□□ -1.52
TPM1P09493 MIR1273E-201ENST00000581165 102 ntBASIC5.55□□□□□ -1.52
TPM1P09493 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.55□□□□□ -1.52
TPM1P09493 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.55□□□□□ -1.52
TPM1P09493 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.55□□□□□ -1.52
TPM1P09493 AC108865.2-201ENST00000606881 432 ntBASIC5.55□□□□□ -1.52
TPM1P09493 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.55□□□□□ -1.52
TPM1P09493 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.55□□□□□ -1.52
TPM1P09493 AL353600.1-201ENST00000608148 251 ntBASIC5.55□□□□□ -1.52
TPM1P09493 OR7M1P-201ENST00000608946 533 ntBASIC5.55□□□□□ -1.52
TPM1P09493 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
TPM1P09493 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.55□□□□□ -1.52
TPM1P09493 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TPM1P09493 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TPM1P09493 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TPM1P09493 CASC19-204ENST00000641001 2055 ntBASIC5.54□□□□□ -1.52
TPM1P09493 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TPM1P09493 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.54□□□□□ -1.52
TPM1P09493 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TPM1P09493 U3.3-201ENST00000362986 216 ntBASIC5.54□□□□□ -1.52
TPM1P09493 AL133325.1-201ENST00000421090 382 ntBASIC5.54□□□□□ -1.52
TPM1P09493 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.54□□□□□ -1.52
TPM1P09493 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.54□□□□□ -1.52
TPM1P09493 RPL7AP61-201ENST00000443410 636 ntBASIC5.54□□□□□ -1.52
TPM1P09493 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.54□□□□□ -1.52
TPM1P09493 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.54□□□□□ -1.52
TPM1P09493 RN7SL515P-201ENST00000463999 297 ntBASIC5.54□□□□□ -1.52
TPM1P09493 AC100832.1-201ENST00000471945 383 ntBASIC5.54□□□□□ -1.52
TPM1P09493 RPL7AP10-201ENST00000481016 791 ntBASIC5.54□□□□□ -1.52
TPM1P09493 EIF1P7-201ENST00000487533 337 ntBASIC5.54□□□□□ -1.52
TPM1P09493 RNA5SP373-201ENST00000517271 95 ntBASIC5.54□□□□□ -1.52
TPM1P09493 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.54□□□□□ -1.52
TPM1P09493 AC024940.3-201ENST00000538551 316 ntBASIC5.54□□□□□ -1.52
TPM1P09493 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.54□□□□□ -1.52
TPM1P09493 AC007066.2-202ENST00000566531 914 ntBASIC5.54□□□□□ -1.52
TPM1P09493 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TPM1P09493 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.54□□□□□ -1.52
TPM1P09493 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.54□□□□□ -1.52
TPM1P09493 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.54□□□□□ -1.52
TPM1P09493 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.54□□□□□ -1.52
TPM1P09493 AC010245.2-201ENST00000606908 1167 ntBASIC5.54□□□□□ -1.52
TPM1P09493 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.54□□□□□ -1.52
TPM1P09493 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.54□□□□□ -1.52
TPM1P09493 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.54□□□□□ -1.52
TPM1P09493 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TPM1P09493 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TPM1P09493 UGT2B26P-201ENST00000508672 1613 ntBASIC5.54□□□□□ -1.52
TPM1P09493 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.54□□□□□ -1.52
TPM1P09493 KARSP1-201ENST00000451871 1752 ntBASIC5.54□□□□□ -1.52
TPM1P09493 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TPM1P09493 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TPM1P09493 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TPM1P09493 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TPM1P09493 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM1P09493 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.53□□□□□ -1.52
TPM1P09493 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TPM1P09493 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TPM1P09493 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TPM1P09493 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM1P09493 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TPM1P09493 AC005332.5-201ENST00000591222 2919 ntBASIC5.53□□□□□ -1.52
TPM1P09493 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM1P09493 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.53□□□□□ -1.52
TPM1P09493 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TPM1P09493 AC233289.1-201ENST00000403700 508 ntBASIC5.53□□□□□ -1.52
TPM1P09493 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.53□□□□□ -1.52
TPM1P09493 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.53□□□□□ -1.52
TPM1P09493 SUMO2P3-201ENST00000438311 288 ntBASIC5.53□□□□□ -1.52
TPM1P09493 DNAJA1P5-201ENST00000440278 943 ntBASIC5.53□□□□□ -1.52
TPM1P09493 PCNPP2-201ENST00000441651 455 ntBASIC5.53□□□□□ -1.52
TPM1P09493 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.53□□□□□ -1.52
TPM1P09493 AC112191.2-201ENST00000522428 333 ntBASIC5.53□□□□□ -1.52
TPM1P09493 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM1P09493 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.53□□□□□ -1.52
TPM1P09493 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM1P09493 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TPM1P09493 AL512310.9-201ENST00000553311 948 ntBASIC5.53□□□□□ -1.52
TPM1P09493 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.53□□□□□ -1.52
TPM1P09493 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.53□□□□□ -1.52
TPM1P09493 MIR6889-201ENST00000613185 59 ntBASIC5.53□□□□□ -1.52
TPM1P09493 MIR8080-201ENST00000622224 89 ntBASIC5.53□□□□□ -1.52
TPM1P09493 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.53□□□□□ -1.52
TPM1P09493 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.53□□□□□ -1.52
TPM1P09493 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.53□□□□□ -1.52
TPM1P09493 AC027228.2-201ENST00000567141 2154 ntBASIC5.53□□□□□ -1.52
TPM1P09493 AC068446.1-201ENST00000556425 1549 ntBASIC5.53□□□□□ -1.52
TPM1P09493 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TPM1P09493 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms