Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC6.35□□□□□ -1.39
HLA-DOAP06340 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 RN7SL708P-201ENST00000580952 299 ntBASIC6.35□□□□□ -1.39
HLA-DOAP06340 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DOAP06340 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 AP003499.2-201ENST00000624100 483 ntBASIC6.35□□□□□ -1.39
HLA-DOAP06340 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DOAP06340 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DOAP06340 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DOAP06340 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOAP06340 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOAP06340 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC009501.3-201ENST00000605001 1352 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOAP06340 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC092681.1-201ENST00000297369 291 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOAP06340 RNA5SP305-201ENST00000362665 119 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 DBIP1-201ENST00000401435 260 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 RN7SKP126-201ENST00000411143 300 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 AL365338.1-201ENST00000422282 858 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 MTND4P24-201ENST00000424002 397 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 MORF4L1P7-201ENST00000426038 703 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 NPM1P25-201ENST00000429734 854 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 BX679664.2-201ENST00000439282 283 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 Z92846.1-201ENST00000456203 268 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 snoU109.3-201ENST00000459477 145 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 AP003355.1-201ENST00000518956 587 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC021451.1-201ENST00000523498 1129 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 C1DP5-201ENST00000525775 383 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC233266.2-201ENST00000567067 528 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC005252.1-201ENST00000604518 1063 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOAP06340 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC004948.1-201ENST00000609858 672 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC090510.2-201ENST00000617465 629 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 AL355493.4-201ENST00000618530 292 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 AC079298.2-201ENST00000623885 459 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 AP000676.4-201ENST00000624659 623 ntBASIC6.34□□□□□ -1.39
HLA-DOAP06340 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOAP06340 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOAP06340 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HLA-DOAP06340 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
HLA-DOAP06340 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.34□□□□□ -1.4
HLA-DOAP06340 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.34□□□□□ -1.4
HLA-DOAP06340 OR4G1P-202ENST00000641173 1788 ntBASIC6.34□□□□□ -1.4
HLA-DOAP06340 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.34□□□□□ -1.4
HLA-DOAP06340 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOAP06340 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOAP06340 HSPA8P18-201ENST00000439846 1928 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOAP06340 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOAP06340 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOAP06340 ZNF29P-201ENST00000225587 168 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 SNORD51.1-201ENST00000365405 77 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms