Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RN7SKP269-201ENST00000365545 319 ntBASIC4.53□□□□□ -1.68
HLA-DPB1P04440 AP000580.1-201ENST00000404439 358 ntBASIC4.53□□□□□ -1.68
HLA-DPB1P04440 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 FABP7P2-201ENST00000429946 379 ntBASIC4.53□□□□□ -1.68
HLA-DPB1P04440 NPM1P33-201ENST00000438918 872 ntBASIC4.53□□□□□ -1.68
HLA-DPB1P04440 RPS11P7-201ENST00000442125 465 ntBASIC4.53□□□□□ -1.68
HLA-DPB1P04440 UBA52P7-201ENST00000486088 380 ntBASIC4.53□□□□□ -1.68
HLA-DPB1P04440 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.53□□□□□ -1.68
HLA-DPB1P04440 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 RN7SKP5-201ENST00000517045 272 ntBASIC4.53□□□□□ -1.68
HLA-DPB1P04440 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 AC116553.2-201ENST00000564203 463 ntBASIC4.53□□□□□ -1.68
HLA-DPB1P04440 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 MIR6768-201ENST00000610734 72 ntBASIC4.53□□□□□ -1.68
HLA-DPB1P04440 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
HLA-DPB1P04440 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
HLA-DPB1P04440 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 MTCO1P11-201ENST00000429111 1528 ntBASIC4.52□□□□□ -1.69
HLA-DPB1P04440 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 AL391361.1-201ENST00000405580 489 ntBASIC4.52□□□□□ -1.69
HLA-DPB1P04440 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 NMNAT1P2-201ENST00000435192 860 ntBASIC4.52□□□□□ -1.69
HLA-DPB1P04440 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 MRPL48P1-201ENST00000445390 636 ntBASIC4.52□□□□□ -1.69
HLA-DPB1P04440 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 AC112184.1-201ENST00000505179 312 ntBASIC4.52□□□□□ -1.69
HLA-DPB1P04440 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 RNA5SP373-201ENST00000517271 95 ntBASIC4.52□□□□□ -1.69
HLA-DPB1P04440 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.52□□□□□ -1.69
HLA-DPB1P04440 CYCSP40-201ENST00000575927 294 ntBASIC4.52□□□□□ -1.69
HLA-DPB1P04440 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 MIR6837-201ENST00000620884 64 ntBASIC4.52□□□□□ -1.69
HLA-DPB1P04440 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 CASC19-264ENST00000641912 1184 ntBASIC4.52□□□□□ -1.69
HLA-DPB1P04440 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 AL133268.1-201ENST00000405676 1401 ntBASIC4.52□□□□□ -1.69
HLA-DPB1P04440 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DPB1P04440 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 SALL4P2-201ENST00000423288 2910 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 RNA5SP90-201ENST00000364801 99 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 RN7SKP199-201ENST00000410325 305 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 OR6C64P-201ENST00000419708 825 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 RNU7-157P-201ENST00000459600 66 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 OR2AO1P-201ENST00000476497 403 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 PGAM1P13-201ENST00000507497 754 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AC005868.1-201ENST00000536421 331 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AL512310.9-201ENST00000553311 948 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 HMGN2P47-201ENST00000559378 272 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms