Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.54□□□□□ -1.52
VTNP04004 AC009238.2-201ENST00000431026 355 ntBASIC5.54□□□□□ -1.52
VTNP04004 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
VTNP04004 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.54□□□□□ -1.52
VTNP04004 BX842559.2-201ENST00000451418 605 ntBASIC5.54□□□□□ -1.52
VTNP04004 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.54□□□□□ -1.52
VTNP04004 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.54□□□□□ -1.52
VTNP04004 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.54□□□□□ -1.52
VTNP04004 AC113398.2-201ENST00000507630 558 ntBASIC5.54□□□□□ -1.52
VTNP04004 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.54□□□□□ -1.52
VTNP04004 AC025857.1-201ENST00000525252 377 ntBASIC5.54□□□□□ -1.52
VTNP04004 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.54□□□□□ -1.52
VTNP04004 AC019322.1-201ENST00000571869 389 ntBASIC5.54□□□□□ -1.52
VTNP04004 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.54□□□□□ -1.52
VTNP04004 AC087468.1-201ENST00000604365 630 ntBASIC5.54□□□□□ -1.52
VTNP04004 AC005377.1-201ENST00000605126 456 ntBASIC5.54□□□□□ -1.52
VTNP04004 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.54□□□□□ -1.52
VTNP04004 AC243960.7-201ENST00000623532 707 ntBASIC5.54□□□□□ -1.52
VTNP04004 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.54□□□□□ -1.52
VTNP04004 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTNP04004 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.54□□□□□ -1.52
VTNP04004 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.54□□□□□ -1.52
VTNP04004 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
VTNP04004 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.54□□□□□ -1.52
VTNP04004 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.54□□□□□ -1.52
VTNP04004 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTNP04004 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VTNP04004 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VTNP04004 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.53□□□□□ -1.52
VTNP04004 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.53□□□□□ -1.52
VTNP04004 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.53□□□□□ -1.52
VTNP04004 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.53□□□□□ -1.52
VTNP04004 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VTNP04004 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 RPL26P29-201ENST00000415623 438 ntBASIC5.53□□□□□ -1.52
VTNP04004 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.53□□□□□ -1.52
VTNP04004 HSPD1P12-201ENST00000429127 1069 ntBASIC5.53□□□□□ -1.52
VTNP04004 USP9YP9-201ENST00000429406 715 ntBASIC5.53□□□□□ -1.52
VTNP04004 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.53□□□□□ -1.52
VTNP04004 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.53□□□□□ -1.52
VTNP04004 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 OR52J1P-201ENST00000450596 932 ntBASIC5.53□□□□□ -1.52
VTNP04004 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.53□□□□□ -1.52
VTNP04004 AC091180.1-201ENST00000462104 372 ntBASIC5.53□□□□□ -1.52
VTNP04004 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 AC012339.2-201ENST00000523996 453 ntBASIC5.53□□□□□ -1.52
VTNP04004 MORF4L1P3-201ENST00000525966 950 ntBASIC5.53□□□□□ -1.52
VTNP04004 AC137768.1-201ENST00000549998 553 ntBASIC5.53□□□□□ -1.52
VTNP04004 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.53□□□□□ -1.52
VTNP04004 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.53□□□□□ -1.52
VTNP04004 AC104785.1-201ENST00000603220 588 ntBASIC5.53□□□□□ -1.52
VTNP04004 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.53□□□□□ -1.52
VTNP04004 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.53□□□□□ -1.52
VTNP04004 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.53□□□□□ -1.52
VTNP04004 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTNP04004 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
VTNP04004 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
VTNP04004 NLRP3P1-201ENST00000622303 1785 ntBASIC5.52□□□□□ -1.53
VTNP04004 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTNP04004 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTNP04004 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTNP04004 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VTNP04004 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.52□□□□□ -1.53
VTNP04004 RNA5SP191-201ENST00000362585 102 ntBASIC5.52□□□□□ -1.53
VTNP04004 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
VTNP04004 AL021331.1-201ENST00000402817 582 ntBASIC5.52□□□□□ -1.53
VTNP04004 AL035079.1-201ENST00000405210 287 ntBASIC5.52□□□□□ -1.53
VTNP04004 RPL12P43-201ENST00000420608 499 ntBASIC5.52□□□□□ -1.53
VTNP04004 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.52□□□□□ -1.53
VTNP04004 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.52□□□□□ -1.53
VTNP04004 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.52□□□□□ -1.53
VTNP04004 AC147055.1-201ENST00000509261 750 ntBASIC5.52□□□□□ -1.53
VTNP04004 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.52□□□□□ -1.53
VTNP04004 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.52□□□□□ -1.53
VTNP04004 BGLT3-201ENST00000564523 994 ntBASIC5.52□□□□□ -1.53
VTNP04004 AL390726.5-202ENST00000564800 256 ntBASIC5.52□□□□□ -1.53
VTNP04004 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.52□□□□□ -1.53
VTNP04004 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VTNP04004 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.52□□□□□ -1.53
VTNP04004 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTNP04004 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTNP04004 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTNP04004 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTNP04004 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTNP04004 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.52□□□□□ -1.53
VTNP04004 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VTNP04004 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.52□□□□□ -1.53
VTNP04004 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTNP04004 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.51□□□□□ -1.53
VTNP04004 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms