Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 ARL5AP3-201ENST00000439327 386 ntBASIC5.27□□□□□ -1.57
LDLRP01130 NANOGP9-201ENST00000439890 892 ntBASIC5.27□□□□□ -1.57
LDLRP01130 IGBP1P3-201ENST00000447449 1000 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AP002345.1-201ENST00000456493 928 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.27□□□□□ -1.57
LDLRP01130 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LDLRP01130 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.27□□□□□ -1.57
LDLRP01130 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 RN7SL547P-201ENST00000490793 290 ntBASIC5.27□□□□□ -1.57
LDLRP01130 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 AC074255.1-201ENST00000511259 501 ntBASIC5.27□□□□□ -1.57
LDLRP01130 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDLRP01130 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.27□□□□□ -1.57
LDLRP01130 RN7SKP253-201ENST00000516424 309 ntBASIC5.27□□□□□ -1.57
LDLRP01130 IGLV3-24-201ENST00000517477 197 ntBASIC5.27□□□□□ -1.57
LDLRP01130 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.27□□□□□ -1.57
LDLRP01130 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.27□□□□□ -1.57
LDLRP01130 HMGN2P6-201ENST00000551091 273 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AL358913.1-201ENST00000554342 121 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.27□□□□□ -1.57
LDLRP01130 AL121839.1-201ENST00000556233 1185 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AC092868.3-201ENST00000560515 784 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AC010487.1-201ENST00000594408 1172 ntBASIC5.27□□□□□ -1.57
LDLRP01130 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 AC012213.4-201ENST00000606457 354 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AL359513.1-201ENST00000614364 557 ntBASIC5.27□□□□□ -1.57
LDLRP01130 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDLRP01130 AC068870.2-201ENST00000620635 389 ntBASIC5.27□□□□□ -1.57
LDLRP01130 MIR6837-201ENST00000620884 64 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AC112255.1-201ENST00000624070 2493 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AC073342.3-201ENST00000624211 193 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AL138960.2-201ENST00000625145 535 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 AC104623.2-202ENST00000623477 4002 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AC068446.1-201ENST00000556425 1549 ntBASIC5.27□□□□□ -1.57
LDLRP01130 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDLRP01130 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDLRP01130 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDLRP01130 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDLRP01130 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDLRP01130 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDLRP01130 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.26□□□□□ -1.57
LDLRP01130 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDLRP01130 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDLRP01130 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
LDLRP01130 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LDLRP01130 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
LDLRP01130 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.26□□□□□ -1.57
LDLRP01130 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDLRP01130 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDLRP01130 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
LDLRP01130 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDLRP01130 MIR223-201ENST00000385204 110 ntBASIC5.26□□□□□ -1.57
LDLRP01130 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.26□□□□□ -1.57
LDLRP01130 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LDLRP01130 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LDLRP01130 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.26□□□□□ -1.57
LDLRP01130 FABP7P2-201ENST00000429946 379 ntBASIC5.26□□□□□ -1.57
LDLRP01130 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.26□□□□□ -1.57
LDLRP01130 HMGB3P24-201ENST00000433260 622 ntBASIC5.26□□□□□ -1.57
LDLRP01130 AL390119.1-201ENST00000440329 312 ntBASIC5.26□□□□□ -1.57
LDLRP01130 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.26□□□□□ -1.57
LDLRP01130 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.26□□□□□ -1.57
LDLRP01130 AC239798.3-201ENST00000454459 408 ntBASIC5.26□□□□□ -1.57
LDLRP01130 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.26□□□□□ -1.57
LDLRP01130 RN7SL172P-201ENST00000460535 303 ntBASIC5.26□□□□□ -1.57
LDLRP01130 AC108161.1-201ENST00000461060 402 ntBASIC5.26□□□□□ -1.57
LDLRP01130 CBX1P5-201ENST00000475330 559 ntBASIC5.26□□□□□ -1.57
LDLRP01130 AC022215.1-201ENST00000481770 362 ntBASIC5.26□□□□□ -1.57
LDLRP01130 AC090543.1-201ENST00000492168 485 ntBASIC5.26□□□□□ -1.57
LDLRP01130 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.26□□□□□ -1.57
LDLRP01130 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.26□□□□□ -1.57
LDLRP01130 HMGB1P47-201ENST00000511281 589 ntBASIC5.26□□□□□ -1.57
LDLRP01130 CDC42P3-201ENST00000518493 633 ntBASIC5.26□□□□□ -1.57
LDLRP01130 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.26□□□□□ -1.57
LDLRP01130 PMS2P3-207ENST00000529061 717 ntBASIC5.26□□□□□ -1.57
LDLRP01130 OR5AM1P-201ENST00000532136 1032 ntBASIC5.26□□□□□ -1.57
LDLRP01130 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.26□□□□□ -1.57
LDLRP01130 AL136520.1-202ENST00000555494 763 ntBASIC5.26□□□□□ -1.57
LDLRP01130 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.26□□□□□ -1.57
LDLRP01130 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.26□□□□□ -1.57
LDLRP01130 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.26□□□□□ -1.57
LDLRP01130 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.26□□□□□ -1.57
LDLRP01130 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.26□□□□□ -1.57
LDLRP01130 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.26□□□□□ -1.57
LDLRP01130 AP002884.5-201ENST00000595053 1132 ntBASIC5.26□□□□□ -1.57
LDLRP01130 AL356608.1-201ENST00000610034 820 ntBASIC5.26□□□□□ -1.57
LDLRP01130 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDLRP01130 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.26□□□□□ -1.57
LDLRP01130 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
LDLRP01130 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDLRP01130 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LDLRP01130 AL078621.3-201ENST00000623707 2042 ntBASIC5.26□□□□□ -1.57
LDLRP01130 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
LDLRP01130 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LDLRP01130 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms