Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
NKX2-2O95096 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-2O95096 CASC19-260ENST00000641828 2001 ntBASIC5.09□□□□□ -1.6
NKX2-2O95096 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NKX2-2O95096 CASC19-284ENST00000642142 1868 ntBASIC5.09□□□□□ -1.6
NKX2-2O95096 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NKX2-2O95096 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NKX2-2O95096 AC100757.1-201ENST00000616872 1835 ntBASIC5.09□□□□□ -1.6
NKX2-2O95096 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.09□□□□□ -1.6
NKX2-2O95096 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
NKX2-2O95096 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.09□□□□□ -1.6
NKX2-2O95096 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.09□□□□□ -1.6
NKX2-2O95096 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.08□□□□□ -1.6
NKX2-2O95096 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.08□□□□□ -1.6
NKX2-2O95096 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NKX2-2O95096 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NKX2-2O95096 SNORD56.4-201ENST00000363883 71 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 RN7SKP15-201ENST00000364742 309 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.08□□□□□ -1.6
NKX2-2O95096 RNU6-354P-201ENST00000383862 107 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 SNORA70.6-201ENST00000383934 134 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 RNU6-481P-201ENST00000384194 107 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 RNU6-610P-201ENST00000384264 107 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 OOSP1-201ENST00000398992 1270 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 PPIAP9-201ENST00000403866 498 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 LINC01347-201ENST00000417964 355 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 TNPO1P1-201ENST00000423641 1138 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 AC009784.1-201ENST00000426484 460 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 AC022022.1-201ENST00000430304 178 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 MTCO1P52-201ENST00000433928 531 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.08□□□□□ -1.6
NKX2-2O95096 AC006994.1-201ENST00000438212 839 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 AL035551.1-201ENST00000446931 348 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 AC144530.1-201ENST00000452862 555 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.08□□□□□ -1.6
NKX2-2O95096 RPS27AP2-201ENST00000457576 465 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 NPM1P28-201ENST00000492269 840 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.08□□□□□ -1.6
NKX2-2O95096 AC090568.1-201ENST00000509499 856 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.08□□□□□ -1.6
NKX2-2O95096 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.08□□□□□ -1.6
NKX2-2O95096 AC112191.2-201ENST00000522428 333 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.08□□□□□ -1.6
NKX2-2O95096 AP005403.1-201ENST00000579720 229 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.08□□□□□ -1.6
NKX2-2O95096 AC008521.2-201ENST00000591021 259 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 AP000864.1-201ENST00000609424 650 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 RNA5SP440-201ENST00000612665 119 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 RNA5SP439-201ENST00000617595 124 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 AC132068.1-201ENST00000623805 459 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
NKX2-2O95096 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.08□□□□□ -1.6
NKX2-2O95096 AC093297.3-201ENST00000607056 2517 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
NKX2-2O95096 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.08□□□□□ -1.6
NKX2-2O95096 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
NKX2-2O95096 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
NKX2-2O95096 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NKX2-2O95096 CASC19-261ENST00000641853 1638 ntBASIC5.08□□□□□ -1.6
NKX2-2O95096 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-2O95096 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.08□□□□□ -1.6
NKX2-2O95096 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-2O95096 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-2O95096 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-2O95096 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.07□□□□□ -1.6
NKX2-2O95096 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-2O95096 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-2O95096 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-2O95096 HSPD1P11-201ENST00000508643 1702 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-2O95096 RNU6-185P-201ENST00000384421 107 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 RNU6-925P-201ENST00000384629 104 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AL031985.1-201ENST00000392713 418 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 RPL22P22-201ENST00000395439 379 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 RN7SKP222-201ENST00000410651 315 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 RPS27AP6-201ENST00000427962 448 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AC079807.1-201ENST00000429993 481 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AC005189.1-201ENST00000431286 310 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 RPL12P17-201ENST00000432393 498 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 FTLP19-201ENST00000433300 394 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AP000936.3-201ENST00000438127 255 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.07□□□□□ -1.6
NKX2-2O95096 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.07□□□□□ -1.6
NKX2-2O95096 AL161636.2-201ENST00000445179 927 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 RPL34P26-201ENST00000445636 354 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms