Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.39□□□□□ -1.55
GPC4O75487 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.39□□□□□ -1.55
GPC4O75487 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.39□□□□□ -1.55
GPC4O75487 MTCO3P22-201ENST00000603219 784 ntBASIC5.39□□□□□ -1.55
GPC4O75487 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.39□□□□□ -1.55
GPC4O75487 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.39□□□□□ -1.55
GPC4O75487 AL139407.1-201ENST00000613826 1175 ntBASIC5.39□□□□□ -1.55
GPC4O75487 BNIP3P41-202ENST00000616656 861 ntBASIC5.39□□□□□ -1.55
GPC4O75487 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.39□□□□□ -1.55
GPC4O75487 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.39□□□□□ -1.55
GPC4O75487 FRG1EP-201ENST00000634469 770 ntBASIC5.39□□□□□ -1.55
GPC4O75487 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
GPC4O75487 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GPC4O75487 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GPC4O75487 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GPC4O75487 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GPC4O75487 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GPC4O75487 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
GPC4O75487 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.39□□□□□ -1.55
GPC4O75487 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
GPC4O75487 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.38□□□□□ -1.55
GPC4O75487 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 AC104623.2-202ENST00000623477 4002 ntBASIC5.38□□□□□ -1.55
GPC4O75487 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.38□□□□□ -1.55
GPC4O75487 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
GPC4O75487 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 RN7SKP124-201ENST00000364730 341 ntBASIC5.38□□□□□ -1.55
GPC4O75487 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 OR6C64P-201ENST00000419708 825 ntBASIC5.38□□□□□ -1.55
GPC4O75487 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.38□□□□□ -1.55
GPC4O75487 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.38□□□□□ -1.55
GPC4O75487 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.38□□□□□ -1.55
GPC4O75487 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.38□□□□□ -1.55
GPC4O75487 ARAFP2-201ENST00000440565 559 ntBASIC5.38□□□□□ -1.55
GPC4O75487 RBMY2TP-201ENST00000451162 947 ntBASIC5.38□□□□□ -1.55
GPC4O75487 RN7SL717P-201ENST00000478343 297 ntBASIC5.38□□□□□ -1.55
GPC4O75487 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 RN7SL466P-201ENST00000497546 295 ntBASIC5.38□□□□□ -1.55
GPC4O75487 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.38□□□□□ -1.55
GPC4O75487 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.38□□□□□ -1.55
GPC4O75487 AC021146.7-201ENST00000509604 775 ntBASIC5.38□□□□□ -1.55
GPC4O75487 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.38□□□□□ -1.55
GPC4O75487 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.38□□□□□ -1.55
GPC4O75487 SNORA26.10-201ENST00000516427 141 ntBASIC5.38□□□□□ -1.55
GPC4O75487 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.38□□□□□ -1.55
GPC4O75487 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.38□□□□□ -1.55
GPC4O75487 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.38□□□□□ -1.55
GPC4O75487 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.38□□□□□ -1.55
GPC4O75487 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
GPC4O75487 MTND4LP25-201ENST00000570218 163 ntBASIC5.38□□□□□ -1.55
GPC4O75487 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.38□□□□□ -1.55
GPC4O75487 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.38□□□□□ -1.55
GPC4O75487 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.38□□□□□ -1.55
GPC4O75487 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.38□□□□□ -1.55
GPC4O75487 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.38□□□□□ -1.55
GPC4O75487 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
GPC4O75487 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.38□□□□□ -1.55
GPC4O75487 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.38□□□□□ -1.55
GPC4O75487 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.38□□□□□ -1.55
GPC4O75487 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.38□□□□□ -1.55
GPC4O75487 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GPC4O75487 AC092376.2-201ENST00000622621 4116 ntBASIC5.38□□□□□ -1.55
GPC4O75487 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC4O75487 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC4O75487 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC4O75487 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
GPC4O75487 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
GPC4O75487 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC4O75487 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
GPC4O75487 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC4O75487 PPIAP9-201ENST00000403866 498 ntBASIC5.37□□□□□ -1.55
GPC4O75487 RNA5SP296-201ENST00000410523 111 ntBASIC5.37□□□□□ -1.55
GPC4O75487 AL445213.1-201ENST00000412589 747 ntBASIC5.37□□□□□ -1.55
GPC4O75487 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.37□□□□□ -1.55
GPC4O75487 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.37□□□□□ -1.55
GPC4O75487 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.37□□□□□ -1.55
GPC4O75487 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC4O75487 AC012075.1-201ENST00000436549 580 ntBASIC5.37□□□□□ -1.55
GPC4O75487 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GPC4O75487 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.37□□□□□ -1.55
GPC4O75487 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.37□□□□□ -1.55
GPC4O75487 AC093663.2-201ENST00000484625 313 ntBASIC5.37□□□□□ -1.55
GPC4O75487 AL049874.2-201ENST00000492636 288 ntBASIC5.37□□□□□ -1.55
GPC4O75487 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC4O75487 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC4O75487 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.37□□□□□ -1.55
GPC4O75487 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms