Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 KPNA2P2-201ENST00000419546 1489 ntBASIC5.07□□□□□ -1.6
SHOX2O60902 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 IRF5P1-201ENST00000504852 2164 ntBASIC5.06□□□□□ -1.6
SHOX2O60902 AC073429.2-201ENST00000569694 1444 ntBASIC5.06□□□□□ -1.6
SHOX2O60902 TLK1P1-201ENST00000456760 2440 ntBASIC5.06□□□□□ -1.6
SHOX2O60902 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHOX2O60902 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.06□□□□□ -1.6
SHOX2O60902 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHOX2O60902 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHOX2O60902 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.06□□□□□ -1.6
SHOX2O60902 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHOX2O60902 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.06□□□□□ -1.6
SHOX2O60902 QRSL1P2-201ENST00000418582 964 ntBASIC5.06□□□□□ -1.6
SHOX2O60902 RGS17P1-201ENST00000423358 553 ntBASIC5.06□□□□□ -1.6
SHOX2O60902 AC115283.1-201ENST00000427353 400 ntBASIC5.06□□□□□ -1.6
SHOX2O60902 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.06□□□□□ -1.6
SHOX2O60902 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.06□□□□□ -1.6
SHOX2O60902 AC104634.1-201ENST00000452720 462 ntBASIC5.06□□□□□ -1.6
SHOX2O60902 AC135999.1-201ENST00000478962 479 ntBASIC5.06□□□□□ -1.6
SHOX2O60902 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.06□□□□□ -1.6
SHOX2O60902 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.06□□□□□ -1.6
SHOX2O60902 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.06□□□□□ -1.6
SHOX2O60902 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.06□□□□□ -1.6
SHOX2O60902 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.06□□□□□ -1.6
SHOX2O60902 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.06□□□□□ -1.6
SHOX2O60902 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.06□□□□□ -1.6
SHOX2O60902 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.06□□□□□ -1.6
SHOX2O60902 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHOX2O60902 SLC25A36P1-201ENST00000590111 465 ntBASIC5.06□□□□□ -1.6
SHOX2O60902 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.06□□□□□ -1.6
SHOX2O60902 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.06□□□□□ -1.6
SHOX2O60902 AC015813.4-201ENST00000610469 179 ntBASIC5.06□□□□□ -1.6
SHOX2O60902 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHOX2O60902 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.06□□□□□ -1.6
SHOX2O60902 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
SHOX2O60902 AC055839.1-201ENST00000634467 498 ntBASIC5.06□□□□□ -1.6
SHOX2O60902 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.06□□□□□ -1.6
SHOX2O60902 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHOX2O60902 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SHOX2O60902 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHOX2O60902 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHOX2O60902 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.06□□□□□ -1.6
SHOX2O60902 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHOX2O60902 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHOX2O60902 AC009643.2-201ENST00000603543 1448 ntBASIC5.06□□□□□ -1.6
SHOX2O60902 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SHOX2O60902 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHOX2O60902 Z98755.1-201ENST00000407015 1384 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHOX2O60902 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHOX2O60902 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHOX2O60902 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SHOX2O60902 YES1P1-201ENST00000418510 1628 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.05□□□□□ -1.6
SHOX2O60902 HMGB1P20-201ENST00000402555 677 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 RN7SKP247-201ENST00000411094 308 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.05□□□□□ -1.6
SHOX2O60902 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.05□□□□□ -1.6
SHOX2O60902 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.05□□□□□ -1.6
SHOX2O60902 AC066692.1-201ENST00000421721 457 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 AL035660.1-201ENST00000422041 222 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.05□□□□□ -1.6
SHOX2O60902 AC069154.1-201ENST00000432914 542 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.05□□□□□ -1.6
SHOX2O60902 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.05□□□□□ -1.6
SHOX2O60902 ELOCP3-201ENST00000439303 348 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.05□□□□□ -1.6
SHOX2O60902 AL450023.3-201ENST00000440592 271 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 AL591623.2-201ENST00000449978 222 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 AC110749.1-201ENST00000462007 357 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 AC010469.1-201ENST00000463864 576 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.05□□□□□ -1.6
SHOX2O60902 AP000648.1-201ENST00000529682 397 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.05□□□□□ -1.6
SHOX2O60902 AL031601.1-201ENST00000605702 394 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 OR8G7P-201ENST00000616658 848 ntBASIC5.05□□□□□ -1.6
SHOX2O60902 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHOX2O60902 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHOX2O60902 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.05□□□□□ -1.6
SHOX2O60902 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.05□□□□□ -1.6
SHOX2O60902 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHOX2O60902 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.05□□□□□ -1.6
SHOX2O60902 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHOX2O60902 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.05□□□□□ -1.6
SHOX2O60902 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHOX2O60902 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.05□□□□□ -1.6
SHOX2O60902 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHOX2O60902 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.04□□□□□ -1.6
SHOX2O60902 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHOX2O60902 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHOX2O60902 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHOX2O60902 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHOX2O60902 RNA5SP394-201ENST00000364216 119 ntBASIC5.04□□□□□ -1.6
SHOX2O60902 SNORA2.3-201ENST00000383920 135 ntBASIC5.04□□□□□ -1.6
SHOX2O60902 RN7SKP216-201ENST00000411050 312 ntBASIC5.04□□□□□ -1.6
SHOX2O60902 VDAC1P9-201ENST00000412766 841 ntBASIC5.04□□□□□ -1.6
SHOX2O60902 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.04□□□□□ -1.6
SHOX2O60902 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHOX2O60902 PRUNEP1-201ENST00000425846 705 ntBASIC5.04□□□□□ -1.6
SHOX2O60902 VDAC1P6-201ENST00000430062 855 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms