Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC019080.5-201ENST00000624891 757 ntBASIC5.04□□□□□ -1.6
SNX3O60493 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX3O60493 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SNX3O60493 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
SNX3O60493 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX3O60493 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX3O60493 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX3O60493 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX3O60493 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX3O60493 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SNX3O60493 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SNX3O60493 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
SNX3O60493 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 SSXP3-201ENST00000442971 1300 ntBASIC5.03□□□□□ -1.6
SNX3O60493 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX3O60493 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX3O60493 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 AC008549.2-201ENST00000333482 706 ntBASIC5.03□□□□□ -1.6
SNX3O60493 IL6STP1-201ENST00000346911 1020 ntBASIC5.03□□□□□ -1.6
SNX3O60493 AC107977.1-201ENST00000355745 939 ntBASIC5.03□□□□□ -1.6
SNX3O60493 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX3O60493 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX3O60493 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 RNU6-40P-201ENST00000384254 107 ntBASIC5.03□□□□□ -1.6
SNX3O60493 MIR551B-201ENST00000384984 96 ntBASIC5.03□□□□□ -1.6
SNX3O60493 RBBP4P5-201ENST00000398583 1266 ntBASIC5.03□□□□□ -1.6
SNX3O60493 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX3O60493 AL133173.1-201ENST00000423458 397 ntBASIC5.03□□□□□ -1.6
SNX3O60493 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.03□□□□□ -1.6
SNX3O60493 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX3O60493 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX3O60493 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 AL161722.1-201ENST00000446972 1032 ntBASIC5.03□□□□□ -1.6
SNX3O60493 VN1R48P-201ENST00000448149 1036 ntBASIC5.03□□□□□ -1.6
SNX3O60493 MTND2P25-201ENST00000449028 610 ntBASIC5.03□□□□□ -1.6
SNX3O60493 AC009963.3-201ENST00000458090 486 ntBASIC5.03□□□□□ -1.6
SNX3O60493 AC091180.1-201ENST00000462104 372 ntBASIC5.03□□□□□ -1.6
SNX3O60493 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX3O60493 LARP7P4-201ENST00000481075 878 ntBASIC5.03□□□□□ -1.6
SNX3O60493 AC112484.3-201ENST00000505910 329 ntBASIC5.03□□□□□ -1.6
SNX3O60493 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX3O60493 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX3O60493 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 AC021146.3-201ENST00000511911 260 ntBASIC5.03□□□□□ -1.6
SNX3O60493 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX3O60493 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX3O60493 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX3O60493 DUX4L52-201ENST00000549363 777 ntBASIC5.03□□□□□ -1.6
SNX3O60493 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.03□□□□□ -1.6
SNX3O60493 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX3O60493 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX3O60493 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX3O60493 RN7SL230P-201ENST00000580835 303 ntBASIC5.03□□□□□ -1.6
SNX3O60493 RN7SL66P-201ENST00000582099 264 ntBASIC5.03□□□□□ -1.6
SNX3O60493 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX3O60493 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX3O60493 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX3O60493 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX3O60493 AC105105.5-201ENST00000622635 1294 ntBASIC5.03□□□□□ -1.6
SNX3O60493 AL356490.1-201ENST00000623079 479 ntBASIC5.03□□□□□ -1.6
SNX3O60493 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
SNX3O60493 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX3O60493 AL022322.2-201ENST00000624072 20397 ntBASIC5.03□□□□□ -1.6
SNX3O60493 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SNX3O60493 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SNX3O60493 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX3O60493 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX3O60493 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX3O60493 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX3O60493 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX3O60493 AC108751.5-201ENST00000492880 1336 ntBASIC5.02□□□□□ -1.61
SNX3O60493 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.02□□□□□ -1.61
SNX3O60493 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.02□□□□□ -1.61
SNX3O60493 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.02□□□□□ -1.61
SNX3O60493 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX3O60493 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX3O60493 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SNX3O60493 RNA5SP477-201ENST00000362639 119 ntBASIC5.02□□□□□ -1.61
SNX3O60493 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.02□□□□□ -1.61
SNX3O60493 RNU6-1263P-201ENST00000384601 106 ntBASIC5.02□□□□□ -1.61
SNX3O60493 SNORA66-201ENST00000384792 133 ntBASIC5.02□□□□□ -1.61
SNX3O60493 SNORD96B-201ENST00000386148 79 ntBASIC5.02□□□□□ -1.61
SNX3O60493 RNA5SP105-201ENST00000391123 113 ntBASIC5.02□□□□□ -1.61
SNX3O60493 OR8V1P-201ENST00000395193 873 ntBASIC5.02□□□□□ -1.61
SNX3O60493 UBE2V1P15-201ENST00000407776 448 ntBASIC5.02□□□□□ -1.61
SNX3O60493 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.02□□□□□ -1.61
SNX3O60493 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX3O60493 MTCYBP7-201ENST00000419540 1134 ntBASIC5.02□□□□□ -1.61
SNX3O60493 AL035660.1-201ENST00000422041 222 ntBASIC5.02□□□□□ -1.61
SNX3O60493 AC104843.2-201ENST00000427666 297 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms