Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXA3O43365 AC008957.3-201ENST00000624112 2242 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXA3O43365 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXA3O43365 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
HOXA3O43365 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA3O43365 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA3O43365 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HOXA3O43365 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXA3O43365 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HOXA3O43365 RACGAP1P-201ENST00000550663 1879 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HOXA3O43365 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HOXA3O43365 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXA3O43365 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA3O43365 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HOXA3O43365 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA3O43365 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
HOXA3O43365 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA3O43365 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HOXA3O43365 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 AL121657.1-201ENST00000327215 531 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXA3O43365 Y_RNA.41-201ENST00000362646 102 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 RNU6-621P-201ENST00000364752 109 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 RNU1-84P-201ENST00000365447 164 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 MIR16-1-201ENST00000385271 89 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 AL391419.1-201ENST00000398901 1275 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA3O43365 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXA3O43365 VN1R20P-201ENST00000425215 966 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXA3O43365 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXA3O43365 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXA3O43365 AL050321.1-201ENST00000432363 400 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 NDUFS5P5-201ENST00000437256 321 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXA3O43365 COX6CP18-201ENST00000448769 222 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 AL358876.1-201ENST00000453364 1075 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 ZNF114P1-201ENST00000453500 292 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA3O43365 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA3O43365 AC104763.1-201ENST00000475274 360 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 TRBV8-2-201ENST00000475637 270 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 RPL9P33-201ENST00000484311 566 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA3O43365 AC026826.1-201ENST00000493002 361 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA3O43365 CYP4F27P-201ENST00000514557 494 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA3O43365 RNA5SP441-201ENST00000516809 88 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA3O43365 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
HOXA3O43365 TOMM20P1-201ENST00000534518 427 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXA3O43365 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA3O43365 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXA3O43365 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA3O43365 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA3O43365 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXA3O43365 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA3O43365 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA3O43365 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA3O43365 RN7SL199P-201ENST00000578752 281 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 RN7SL656P-201ENST00000579044 281 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA3O43365 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA3O43365 RN7SL404P-201ENST00000582421 281 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 AC245052.7-201ENST00000601161 359 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 AC090525.3-201ENST00000605601 189 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 AC138749.5-201ENST00000611461 208 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA3O43365 AC099063.3-201ENST00000642066 185 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HOXA3O43365 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXA3O43365 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXA3O43365 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.32□□□□□ -1.56
HOXA3O43365 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXA3O43365 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA3O43365 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 AC012020.1-201ENST00000624541 1728 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms