Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM38O00635 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM38O00635 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM38O00635 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM38O00635 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM38O00635 AC005412.1-201ENST00000580812 1049 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM38O00635 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM38O00635 AL451049.1-201ENST00000608672 497 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM38O00635 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM38O00635 AL691477.1-201ENST00000624398 162 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM38O00635 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM38O00635 AC109446.4-201ENST00000623235 2755 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM38O00635 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
TRIM38O00635 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TRIM38O00635 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM38O00635 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM38O00635 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC026523.2-201ENST00000625039 7739 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
TRIM38O00635 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM38O00635 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM38O00635 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
TRIM38O00635 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM38O00635 RNA5SP46-201ENST00000362370 120 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM38O00635 RNU6-1000P-201ENST00000391066 106 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 VPS26BP1-201ENST00000417155 755 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 DPPA2P2-201ENST00000418220 897 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM38O00635 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM38O00635 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM38O00635 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM38O00635 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM38O00635 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM38O00635 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM38O00635 SETP8-201ENST00000435341 628 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AL445928.1-201ENST00000435545 222 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AL645931.1-201ENST00000439737 410 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AL445669.2-201ENST00000454425 421 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM38O00635 AC093166.4-201ENST00000457867 318 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 CBX1P5-201ENST00000475330 559 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM38O00635 PDCL3P4-201ENST00000489621 720 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM38O00635 CCDC11P1-201ENST00000503137 1162 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM38O00635 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM38O00635 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM38O00635 DUTP7-201ENST00000507982 486 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC109481.1-201ENST00000509173 282 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 MTND4LP31-201ENST00000514859 294 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 RN7SKP288-201ENST00000516227 268 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM38O00635 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM38O00635 IGKV2-18-201ENST00000522607 343 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM38O00635 AC027026.1-201ENST00000532323 742 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TRIM38O00635 AC139103.1-201ENST00000534696 1030 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM38O00635 AGGF1P9-201ENST00000561884 913 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM38O00635 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM38O00635 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM38O00635 OR1AB1P-201ENST00000585564 761 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM38O00635 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM38O00635 AC006115.2-201ENST00000596823 202 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC013244.3-201ENST00000605614 388 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC011374.2-201ENST00000607135 526 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 RN7SL544P-201ENST00000617232 284 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AL355974.3-201ENST00000617383 467 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC078880.5-201ENST00000617845 421 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AP004607.9-201ENST00000618202 316 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 RN7SL763P-201ENST00000620922 284 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC010435.1-201ENST00000623353 1177 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC073869.7-201ENST00000640874 297 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC087565.3-203ENST00000641018 837 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM38O00635 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM38O00635 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM38O00635 MFSD8-219ENST00000641228 2559 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM38O00635 AC016745.2-201ENST00000608834 3443 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 AC020633.1-201ENST00000468439 2247 ntBASIC5.78□□□□□ -1.48
TRIM38O00635 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM38O00635 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM38O00635 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TRIM38O00635 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM38O00635 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM38O00635 CASC19-284ENST00000642142 1868 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM38O00635 THAP12P9-201ENST00000503971 2360 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
TRIM38O00635 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms