Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MIR1269B-201ENST00000580405 75 ntBASIC5.55□□□□□ -1.52
O00370 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
O00370 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
O00370 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.55□□□□□ -1.52
O00370 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.55□□□□□ -1.52
O00370 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.55□□□□□ -1.52
O00370 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.55□□□□□ -1.52
O00370 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
O00370 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
O00370 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
O00370 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.55□□□□□ -1.52
O00370 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
O00370 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
O00370 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.54□□□□□ -1.52
O00370 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.54□□□□□ -1.52
O00370 AC008079.2-201ENST00000623543 20396 ntBASIC5.54□□□□□ -1.52
O00370 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.54□□□□□ -1.52
O00370 CIR1P2-201ENST00000514821 1342 ntBASIC5.54□□□□□ -1.52
O00370 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.54□□□□□ -1.52
O00370 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
O00370 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.54□□□□□ -1.52
O00370 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
O00370 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
O00370 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
O00370 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
O00370 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
O00370 RNA5SP90-201ENST00000364801 99 ntBASIC5.54□□□□□ -1.52
O00370 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
O00370 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
O00370 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.54□□□□□ -1.52
O00370 DUTP5-201ENST00000406790 469 ntBASIC5.54□□□□□ -1.52
O00370 MTND3P20-201ENST00000407663 186 ntBASIC5.54□□□□□ -1.52
O00370 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.54□□□□□ -1.52
O00370 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.54□□□□□ -1.52
O00370 RPS4XP16-201ENST00000427198 791 ntBASIC5.54□□□□□ -1.52
O00370 CNOT7P2-201ENST00000441051 832 ntBASIC5.54□□□□□ -1.52
O00370 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.54□□□□□ -1.52
O00370 FAR2P1-206ENST00000449736 709 ntBASIC5.54□□□□□ -1.52
O00370 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.54□□□□□ -1.52
O00370 RN7SL189P-201ENST00000468631 289 ntBASIC5.54□□□□□ -1.52
O00370 AC072052.1-201ENST00000496556 306 ntBASIC5.54□□□□□ -1.52
O00370 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.54□□□□□ -1.52
O00370 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.54□□□□□ -1.52
O00370 SCARNA21.2-201ENST00000516600 166 ntBASIC5.54□□□□□ -1.52
O00370 RNU6-362P-201ENST00000516736 90 ntBASIC5.54□□□□□ -1.52
O00370 AC012400.1-201ENST00000518452 381 ntBASIC5.54□□□□□ -1.52
O00370 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.54□□□□□ -1.52
O00370 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.54□□□□□ -1.52
O00370 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
O00370 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.54□□□□□ -1.52
O00370 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.54□□□□□ -1.52
O00370 AC090022.1-201ENST00000546569 311 ntBASIC5.54□□□□□ -1.52
O00370 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
O00370 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
O00370 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
O00370 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
O00370 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.54□□□□□ -1.52
O00370 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.54□□□□□ -1.52
O00370 AC007448.1-201ENST00000582714 234 ntBASIC5.54□□□□□ -1.52
O00370 SUMO2P15-201ENST00000604285 278 ntBASIC5.54□□□□□ -1.52
O00370 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.54□□□□□ -1.52
O00370 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.54□□□□□ -1.52
O00370 AC126915.2-201ENST00000610957 190 ntBASIC5.54□□□□□ -1.52
O00370 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.54□□□□□ -1.52
O00370 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.54□□□□□ -1.52
O00370 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.54□□□□□ -1.52
O00370 AC004817.4-201ENST00000602396 3625 ntBASIC5.54□□□□□ -1.52
O00370 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
O00370 AC114947.2-201ENST00000565748 2125 ntBASIC5.54□□□□□ -1.52
O00370 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
O00370 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.54□□□□□ -1.52
O00370 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
O00370 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.54□□□□□ -1.52
O00370 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.54□□□□□ -1.52
O00370 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
O00370 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
O00370 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
O00370 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
O00370 AL731532.2-201ENST00000623542 1953 ntBASIC5.53□□□□□ -1.52
O00370 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
O00370 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.53□□□□□ -1.52
O00370 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
O00370 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.53□□□□□ -1.52
O00370 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
O00370 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
O00370 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
O00370 AC017079.1-201ENST00000333650 415 ntBASIC5.53□□□□□ -1.52
O00370 RNU1-43P-201ENST00000365052 165 ntBASIC5.53□□□□□ -1.52
O00370 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
O00370 RNU1-74P-201ENST00000384108 171 ntBASIC5.53□□□□□ -1.52
O00370 RN7SKP16-201ENST00000410180 299 ntBASIC5.53□□□□□ -1.52
O00370 AP000534.2-201ENST00000412729 568 ntBASIC5.53□□□□□ -1.52
O00370 GTF3AP1-201ENST00000416942 1004 ntBASIC5.53□□□□□ -1.52
O00370 AL355433.1-201ENST00000422804 300 ntBASIC5.53□□□□□ -1.52
O00370 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.53□□□□□ -1.52
O00370 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.53□□□□□ -1.52
O00370 AL161722.2-201ENST00000434731 981 ntBASIC5.53□□□□□ -1.52
O00370 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.53□□□□□ -1.52
O00370 TPT1P1-201ENST00000458495 518 ntBASIC5.53□□□□□ -1.52
O00370 RN7SL172P-201ENST00000460535 303 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms