Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 NENFP1-201ENST00000419476 466 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 MTND4LP13-201ENST00000425022 298 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AHCYP8-201ENST00000425108 209 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 RPS26P40-201ENST00000435209 294 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC064862.5-201ENST00000440618 334 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 COL11A2P1-205ENST00000441798 676 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AL445466.1-201ENST00000448432 357 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 DBIL5P-202ENST00000453414 250 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AL591866.1-201ENST00000456162 401 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AL136097.1-201ENST00000456945 913 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AKR1D1P1-201ENST00000457236 936 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC007537.2-201ENST00000472093 511 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 METTL15P1-201ENST00000481421 1045 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC090142.2-201ENST00000483263 416 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC097173.1-201ENST00000505862 819 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 OR2AL1P-201ENST00000529862 507 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 MIR3194-201ENST00000582236 73 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 WDR45BP1-201ENST00000583470 1029 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 CDC42EP3P1-201ENST00000601004 764 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 Z82195.1-201ENST00000604558 398 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AL357137.1-201ENST00000604645 203 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC104117.5-201ENST00000606195 547 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC079395.2-201ENST00000610982 737 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 GNAS-AS1_5.1-201ENST00000614281 121 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AL713922.2-201ENST00000619384 716 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC005753.1-201ENST00000623837 618 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 MTCO1P1-201ENST00000624263 1081 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC005691.1-201ENST00000624723 401 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 VPS35P1-201ENST00000563400 1518 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 AC066616.2-201ENST00000559334 1481 ntBASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01558Q9Y6Z2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 ERCC6-202ENST00000374127 1782 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC025031.4-201ENST00000621248 3271 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 OR52B3P-201ENST00000314715 928 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 ZNF880-201ENST00000344085 496 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 RNA5SP388-201ENST00000362584 119 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 CST13P-201ENST00000376992 428 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 RN7SKP29-201ENST00000410957 272 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 RPL35AP3-201ENST00000414680 288 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 HMGB3P5-201ENST00000428894 612 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 USP9YP7-201ENST00000436723 430 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 PTMAP6-201ENST00000439110 327 ntBASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01558Q9Y6Z2 OR11Q1P-201ENST00000451582 877 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms