Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 NSRP1P1-201ENST00000444067 1693 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 PARP4P2-201ENST00000446672 3326 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 CASC19-260ENST00000641828 2001 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 RNA5SP435-201ENST00000364044 108 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC104843.2-201ENST00000427666 297 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 MTND6P12-201ENST00000428247 522 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 CDY14P-201ENST00000431260 1014 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 CBX1P4-201ENST00000439415 457 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 CDY12P-201ENST00000440679 1015 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 CDY13P-201ENST00000445813 1015 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 CDY23P-201ENST00000451661 1014 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 LRRC37A14P-201ENST00000452297 462 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 UBFD1P1-201ENST00000473259 814 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 RPL23AP37-201ENST00000479658 549 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 RN7SL57P-201ENST00000493687 290 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AP001372.4-201ENST00000524889 472 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 NPM1P42-201ENST00000560329 862 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 CYP2C60P-201ENST00000566088 139 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC112220.2-201ENST00000605513 533 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC145423.1-201ENST00000605712 336 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC013468.1-201ENST00000608680 598 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC008115.4-201ENST00000619780 775 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 AC008691.1-209ENST00000642094 814 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 DNM1P47-203ENST00000571780 12667 ntBASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COL4A3BPQ9Y5P4 WDR95P-201ENST00000425638 1542 ntBASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 AL137141.1-201ENST00000624622 4836 ntBASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 PWAR1-201ENST00000624188 2414 ntBASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 ANKRD36P1-201ENST00000344424 659 ntBASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 RNA5SP500-201ENST00000364486 119 ntBASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 AC245060.4-201ENST00000413293 1121 ntBASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 MTCO2P17-201ENST00000424336 677 ntBASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 OSTCP5-201ENST00000425293 453 ntBASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 OR5AW1P-201ENST00000426334 1006 ntBASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.55□□□□□ -1.36
COL4A3BPQ9Y5P4 NPM1P39-201ENST00000449818 867 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms