Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC096586.1-201ENST00000610267 561 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC093783.1-201ENST00000612976 329 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AL355974.3-201ENST00000617383 467 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC022079.1-201ENST00000621546 602 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AP003485.2-201ENST00000623636 610 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC093297.3-201ENST00000607056 2517 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 RNA5SP211-201ENST00000365516 117 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 RNU6-224P-201ENST00000384055 107 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 Y_RNA.578-201ENST00000390903 88 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AL136310.1-201ENST00000404926 654 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 MIR1178-201ENST00000408396 91 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC105402.1-201ENST00000413336 545 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 RPS3AP37-201ENST00000419176 745 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AL513175.2-201ENST00000422071 443 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AL121776.1-201ENST00000429337 372 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 RPL7P34-201ENST00000433316 712 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 HMGB3P6-201ENST00000444896 598 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC008638.1-201ENST00000506035 866 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC138866.2-201ENST00000508650 584 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC119751.1-201ENST00000513357 765 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 RN7SKP288-201ENST00000516227 268 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC006518.2-201ENST00000542513 940 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 OR11H3P-201ENST00000554547 982 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC007225.2-201ENST00000562529 256 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 MIR3176-201ENST00000582210 90 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AL583832.1-201ENST00000603227 784 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AL035411.2-201ENST00000604022 421 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 MIR6793-201ENST00000612376 63 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 uc_338.26-201ENST00000612659 160 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 FRG1HP-204ENST00000617940 757 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AP002967.1-201ENST00000624203 539 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 AC119674.1-212ENST00000641155 993 ntBASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB1Q9Y5F3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 RBPJP7-201ENST00000442803 1447 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 RBPJP5-201ENST00000449433 1447 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms