Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF6Q9Y252 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF6Q9Y252 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF6Q9Y252 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF6Q9Y252 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF6Q9Y252 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF6Q9Y252 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF6Q9Y252 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNF6Q9Y252 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AC100778.3-201ENST00000580060 1750 ntBASIC4.97□□□□□ -1.61
RNF6Q9Y252 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 RNU6-386P-201ENST00000362650 107 ntBASIC4.97□□□□□ -1.61
RNF6Q9Y252 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF6Q9Y252 RN7SKP273-201ENST00000411392 314 ntBASIC4.97□□□□□ -1.61
RNF6Q9Y252 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 RCC2P2-201ENST00000422174 918 ntBASIC4.97□□□□□ -1.61
RNF6Q9Y252 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 OTX2P1-201ENST00000450956 354 ntBASIC4.97□□□□□ -1.61
RNF6Q9Y252 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 TPT1P1-201ENST00000458495 518 ntBASIC4.97□□□□□ -1.61
RNF6Q9Y252 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AC004453.1-201ENST00000487895 408 ntBASIC4.97□□□□□ -1.61
RNF6Q9Y252 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNF6Q9Y252 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 RN7SKP34-201ENST00000516142 244 ntBASIC4.97□□□□□ -1.61
RNF6Q9Y252 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AP000769.2-201ENST00000602344 396 ntBASIC4.97□□□□□ -1.61
RNF6Q9Y252 AL451049.1-201ENST00000608672 497 ntBASIC4.97□□□□□ -1.61
RNF6Q9Y252 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AL118522.2-201ENST00000616045 615 ntBASIC4.97□□□□□ -1.61
RNF6Q9Y252 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.97□□□□□ -1.61
RNF6Q9Y252 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF6Q9Y252 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF6Q9Y252 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF6Q9Y252 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF6Q9Y252 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNF6Q9Y252 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNF6Q9Y252 MTCO1P7-201ENST00000419523 1542 ntBASIC4.97□□□□□ -1.61
RNF6Q9Y252 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.97□□□□□ -1.61
RNF6Q9Y252 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.96□□□□□ -1.61
RNF6Q9Y252 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
RNF6Q9Y252 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
RNF6Q9Y252 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
RNF6Q9Y252 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF6Q9Y252 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF6Q9Y252 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF6Q9Y252 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNF6Q9Y252 AC017079.1-201ENST00000333650 415 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 AC005294.1-201ENST00000355509 281 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 MIR551A-201ENST00000385042 96 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 AL390774.1-201ENST00000411924 246 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 PCNPP4-201ENST00000414817 517 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 AL133325.1-201ENST00000421090 382 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 AL157385.1-201ENST00000446973 268 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 FAR2P1-206ENST00000449736 709 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 RPS26P41-201ENST00000450370 284 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 C1DP3-201ENST00000455013 423 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 NIFKP7-201ENST00000503365 834 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNF6Q9Y252 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 AC006349.1-201ENST00000555526 235 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 EIF1AXP2-201ENST00000555940 413 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF6Q9Y252 AC024940.4-201ENST00000605507 246 ntBASIC4.96□□□□□ -1.62
RNF6Q9Y252 AL445222.1-201ENST00000607259 628 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms