Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC88CQ9P219 AC011626.1-201ENST00000604710 562 ntBASIC4.82□□□□□ -1.64
CCDC88CQ9P219 AC019206.1-201ENST00000621938 425 ntBASIC4.82□□□□□ -1.64
CCDC88CQ9P219 AC099494.2-201ENST00000623371 978 ntBASIC4.82□□□□□ -1.64
CCDC88CQ9P219 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC88CQ9P219 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 U3.3-201ENST00000362986 216 ntBASIC4.81□□□□□ -1.64
CCDC88CQ9P219 MIR1182-201ENST00000408363 97 ntBASIC4.81□□□□□ -1.64
CCDC88CQ9P219 AL360081.1-201ENST00000428299 555 ntBASIC4.81□□□□□ -1.64
CCDC88CQ9P219 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 OR7E128P-201ENST00000532736 1024 ntBASIC4.81□□□□□ -1.64
CCDC88CQ9P219 PCNPP1-201ENST00000552501 511 ntBASIC4.81□□□□□ -1.64
CCDC88CQ9P219 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 AL731532.2-201ENST00000623542 1953 ntBASIC4.81□□□□□ -1.64
CCDC88CQ9P219 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 AC068446.1-201ENST00000556425 1549 ntBASIC4.81□□□□□ -1.64
CCDC88CQ9P219 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCDC88CQ9P219 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 RNVU1-6-201ENST00000364688 164 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 RPL10P10-201ENST00000403509 664 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 U3.32-201ENST00000408116 212 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 RPL12P9-201ENST00000412942 488 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 QRSL1P2-201ENST00000418582 964 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC000111.2-201ENST00000448200 210 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 RN7SL441P-201ENST00000492388 296 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 RNA5SP392-201ENST00000516905 112 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC022360.1-201ENST00000521058 340 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 MORF4L1P3-201ENST00000525966 950 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC010503.3-201ENST00000594355 540 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC006484.1-201ENST00000435086 1884 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC016772.1-201ENST00000444170 1261 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC009127.1-201ENST00000467090 155 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 RN7SL738P-201ENST00000470264 297 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC093720.1-201ENST00000505681 714 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 RNA5SP43-201ENST00000516559 110 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC012400.1-201ENST00000518452 381 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 MIR3934-201ENST00000579806 107 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AL031320.1-201ENST00000604177 357 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 MIR6748-201ENST00000610433 71 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC112694.2-201ENST00000623697 768 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC003985.2-201ENST00000562268 1669 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC087190.4-201ENST00000574616 8334 ntBASIC4.8□□□□□ -1.64
CCDC88CQ9P219 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC88CQ9P219 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms