Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CISHQ9NSE2 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CISHQ9NSE2 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CISHQ9NSE2 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CISHQ9NSE2 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CISHQ9NSE2 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CISHQ9NSE2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CISHQ9NSE2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CISHQ9NSE2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CISHQ9NSE2 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 AC017079.1-201ENST00000333650 415 ntBASIC5.27□□□□□ -1.57
CISHQ9NSE2 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.27□□□□□ -1.57
CISHQ9NSE2 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CISHQ9NSE2 RNA5SP392-201ENST00000516905 112 ntBASIC5.27□□□□□ -1.57
CISHQ9NSE2 AC026688.1-201ENST00000520639 1168 ntBASIC5.27□□□□□ -1.57
CISHQ9NSE2 OR5AZ1P-201ENST00000527448 943 ntBASIC5.27□□□□□ -1.57
CISHQ9NSE2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CISHQ9NSE2 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 AC073575.2-201ENST00000614212 627 ntBASIC5.27□□□□□ -1.57
CISHQ9NSE2 AC037198.3-201ENST00000616754 526 ntBASIC5.27□□□□□ -1.57
CISHQ9NSE2 AC112694.2-201ENST00000623697 768 ntBASIC5.27□□□□□ -1.57
CISHQ9NSE2 MAPK10-338ENST00000641647 3362 ntBASIC5.27□□□□□ -1.57
CISHQ9NSE2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CISHQ9NSE2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CISHQ9NSE2 NCOA4P2-201ENST00000340589 1813 ntBASIC5.27□□□□□ -1.57
CISHQ9NSE2 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.27□□□□□ -1.57
CISHQ9NSE2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CISHQ9NSE2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CISHQ9NSE2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CISHQ9NSE2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CISHQ9NSE2 INTS6P1-201ENST00000504674 2530 ntBASIC5.26□□□□□ -1.57
CISHQ9NSE2 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CISHQ9NSE2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CISHQ9NSE2 MIPEPP2-201ENST00000422560 1819 ntBASIC5.26□□□□□ -1.57
CISHQ9NSE2 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
CISHQ9NSE2 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CISHQ9NSE2 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CISHQ9NSE2 AL589647.1-201ENST00000402485 466 ntBASIC5.26□□□□□ -1.57
CISHQ9NSE2 AL357515.1-201ENST00000402967 542 ntBASIC5.26□□□□□ -1.57
CISHQ9NSE2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.26□□□□□ -1.57
CISHQ9NSE2 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.26□□□□□ -1.57
CISHQ9NSE2 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CISHQ9NSE2 BX119904.3-201ENST00000428194 957 ntBASIC5.26□□□□□ -1.57
CISHQ9NSE2 AL590399.4-201ENST00000436561 601 ntBASIC5.26□□□□□ -1.57
CISHQ9NSE2 AC000111.2-201ENST00000448200 210 ntBASIC5.26□□□□□ -1.57
CISHQ9NSE2 RN7SL329P-201ENST00000467740 299 ntBASIC5.26□□□□□ -1.57
CISHQ9NSE2 PPP1R11P1-201ENST00000486095 376 ntBASIC5.26□□□□□ -1.57
CISHQ9NSE2 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.26□□□□□ -1.57
CISHQ9NSE2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.26□□□□□ -1.57
CISHQ9NSE2 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CISHQ9NSE2 AC090510.2-201ENST00000617465 629 ntBASIC5.26□□□□□ -1.57
CISHQ9NSE2 AL353662.3-201ENST00000625131 237 ntBASIC5.26□□□□□ -1.57
CISHQ9NSE2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.26□□□□□ -1.57
CISHQ9NSE2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CISHQ9NSE2 Z95331.1-201ENST00000623075 23112 ntBASIC5.26□□□□□ -1.57
CISHQ9NSE2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CISHQ9NSE2 AC099654.2-201ENST00000433031 1980 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CISHQ9NSE2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CISHQ9NSE2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CISHQ9NSE2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CISHQ9NSE2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CISHQ9NSE2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.25□□□□□ -1.57
CISHQ9NSE2 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CISHQ9NSE2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CISHQ9NSE2 AL109941.1-201ENST00000401925 229 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 GTF2IP5-201ENST00000414608 731 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 TBCAP2-201ENST00000416175 326 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.25□□□□□ -1.57
CISHQ9NSE2 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.25□□□□□ -1.57
CISHQ9NSE2 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.25□□□□□ -1.57
CISHQ9NSE2 AC093414.1-201ENST00000434712 514 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.25□□□□□ -1.57
CISHQ9NSE2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CISHQ9NSE2 BTF3P6-201ENST00000448054 499 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.25□□□□□ -1.57
CISHQ9NSE2 RPL23AP56-201ENST00000460778 453 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 RN7SL517P-201ENST00000462240 305 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 AC090142.2-201ENST00000483263 416 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 AC027308.1-201ENST00000517993 110 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.25□□□□□ -1.57
CISHQ9NSE2 AC005868.1-201ENST00000536421 331 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 GCSHP4-201ENST00000538792 439 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 AC008033.2-201ENST00000542626 177 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 AC087783.2-201ENST00000605070 562 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 AC133644.2-201ENST00000608142 540 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 AP001521.2-201ENST00000608772 546 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms