Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 AC010627.1-201ENST00000503819 1294 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTA1Q9NP79 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 RNU6-1028P-201ENST00000517164 93 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 OR7E128P-201ENST00000532736 1024 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 AC126615.2-201ENST00000553003 515 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 AC007346.2-201ENST00000564816 892 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 FKBP1AP1-201ENST00000594588 318 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 AC010245.2-201ENST00000606908 1167 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 AC090607.5-201ENST00000615692 224 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTA1Q9NP79 AL031658.2-201ENST00000616850 651 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 AC018445.2-201ENST00000622987 260 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 CASC19-264ENST00000641912 1184 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTA1Q9NP79 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VTA1Q9NP79 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTA1Q9NP79 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTA1Q9NP79 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTA1Q9NP79 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VTA1Q9NP79 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTA1Q9NP79 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.46□□□□□ -1.37
VTA1Q9NP79 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
VTA1Q9NP79 AC083837.1-201ENST00000565297 2994 ntBASIC6.46□□□□□ -1.37
VTA1Q9NP79 AL590763.1-201ENST00000398297 1545 ntBASIC6.46□□□□□ -1.37
VTA1Q9NP79 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
VTA1Q9NP79 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
VTA1Q9NP79 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
VTA1Q9NP79 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VTA1Q9NP79 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VTA1Q9NP79 RNU5B-1-201ENST00000363286 116 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VTA1Q9NP79 RNU6-171P-201ENST00000384354 107 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 RNU4-34P-201ENST00000410431 124 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 HMGB3P10-201ENST00000434734 572 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 AC096775.1-201ENST00000437724 448 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 MTCYBP31-201ENST00000438855 1122 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 AC000041.1-201ENST00000439655 175 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 MTND1P31-201ENST00000449206 961 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 AL606490.1-201ENST00000452266 765 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 RANP1-206ENST00000455094 651 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 MTCO1P18-201ENST00000455518 1419 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 GTF2IP12-201ENST00000456547 356 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 AC096992.1-201ENST00000459808 709 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 RN7SL515P-201ENST00000463999 297 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 AC107398.1-201ENST00000486904 505 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 BTG4P1-201ENST00000510421 183 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VTA1Q9NP79 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 AC244502.2-201ENST00000543361 851 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VTA1Q9NP79 AL021707.7-201ENST00000607991 416 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 AC004232.3-201ENST00000622977 525 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VTA1Q9NP79 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VTA1Q9NP79 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 MFSD8-219ENST00000641228 2559 ntBASIC6.46□□□□□ -1.38
VTA1Q9NP79 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
VTA1Q9NP79 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.46□□□□□ -1.38
VTA1Q9NP79 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VTA1Q9NP79 MT-RNR2-201ENST00000387347 1559 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VTA1Q9NP79 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VTA1Q9NP79 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VTA1Q9NP79 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 RNA5SP319-201ENST00000362768 119 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 RNA5SP234-201ENST00000363916 119 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms